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The map label for this gene is 28378012

Identifier: 28378012

GI number: 28378012

Start: 1129375

End: 1129752

Strand: Direct

Name: 28378012

Synonym: lp_1243

Alternate gene names: NA

Gene position: 1129375-1129752 (Clockwise)

Preceding gene: 28378010

Following gene: 28378013

Centisome position: 34.14

GC content: 42.59

Gene sequence:

>378_bases
TTGGCTTTTTTGAAGATTGATAACGGTGAATTACTTAAGAATATTCGGCAATTTGCCAAGAAAAATGGTCTGACCTTAGC
GGAAGTGGCGACCTTAGCCGGCTTAAGTGCGAGTGCTATCTATAGTTGGAAAAAGCACACGCCGTCAGTCGGTACGCTTA
AGGAAGTTGCTCAAGTGCTCGGCACGAGTTATACCAAATTGGTTGGTAAGGATAAAGAACCGACAGCTAAGGCGACCAAT
GCCGCTGCTGTTGATCTTAAAAAAGTGATTGAAAACAAGAAAAACCAGTTTGAATACGACGGCCAGCCGATTACTAATGA
ACAGATGAAAATTATCAGAAACGTCTTGAAGTCGATGTTTAAGACCCCGCGACTTTAA

Upstream 100 bases:

>100_bases
CAAAGTTGTTGCAAATGAGTTGCGGTTCGATTAAGTAATGTCAACAGCTTGAGTGGATTAACAATAATTGATTAGATCTT
GACCGATAGGAGTGACGAAC

Downstream 100 bases:

>100_bases
TTTTAAGTAAAACTCGGTTCTTTTAGGTGCAACTGGGACCTGCTTAGTGTAAAATATTGCTCAGTTACTTGAATAATTGC
TAGCAGCGCTTGACGGGTTT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAFLKIDNGELLKNIRQFAKKNGLTLAEVATLAGLSASAIYSWKKHTPSVGTLKEVAQVLGTSYTKLVGKDKEPTAKATN
AAAVDLKKVIENKKNQFEYDGQPITNEQMKIIRNVLKSMFKTPRL

Sequences:

>Translated_125_residues
MAFLKIDNGELLKNIRQFAKKNGLTLAEVATLAGLSASAIYSWKKHTPSVGTLKEVAQVLGTSYTKLVGKDKEPTAKATN
AAAVDLKKVIENKKNQFEYDGQPITNEQMKIIRNVLKSMFKTPRL
>Mature_124_residues
AFLKIDNGELLKNIRQFAKKNGLTLAEVATLAGLSASAIYSWKKHTPSVGTLKEVAQVLGTSYTKLVGKDKEPTAKATNA
AAVDLKKVIENKKNQFEYDGQPITNEQMKIIRNVLKSMFKTPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13808; Mature: 13677

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLKIDNGELLKNIRQFAKKNGLTLAEVATLAGLSASAIYSWKKHTPSVGTLKEVAQVL
CEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
GTSYTKLVGKDKEPTAKATNAAAVDLKKVIENKKNQFEYDGQPITNEQMKIIRNVLKSMF
CCHHHHHHCCCCCCCCHHCCHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
KTPRL
CCCCC
>Mature Secondary Structure 
AFLKIDNGELLKNIRQFAKKNGLTLAEVATLAGLSASAIYSWKKHTPSVGTLKEVAQVL
EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
GTSYTKLVGKDKEPTAKATNAAAVDLKKVIENKKNQFEYDGQPITNEQMKIIRNVLKSMF
CCHHHHHHCCCCCCCCHHCCHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
KTPRL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA