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The map label for this gene is cps1F

Identifier: 28377956

GI number: 28377956

Start: 1079618

End: 1080241

Strand: Direct

Name: cps1F

Synonym: lp_1182

Alternate gene names: NA

Gene position: 1079618-1080241 (Clockwise)

Preceding gene: 28377955

Following gene: 28377957

Centisome position: 32.63

GC content: 35.9

Gene sequence:

>624_bases
ATGAAATCAAATTTTTCGTTTTTACCATTTTTTAAAGTATTGTGGTATCGTCTCTTTTGGATTGTACTATTTGCTGTTTT
AGGTGGCATTTCTGGCTATTTTGTTGAACGGCAAATGTTCACTCCACAATACTCAGTATCGTCAACTGTCAGTGTATACC
ACGTTAAGTCCAAAGCTGGTTCGAATTTAGACCAATTAAATACCGATGTGAACCGCTTGGGAACAGTACAAAGTGAAATT
GGTGATCCAGGGATTTATGCTAATGCGAGTCGGTTGGTAAAAGAGAATAAAGGAACCTCGATCCCAACAAAATATTTTAT
TGAGCATGTGAGTGTTTCAGCCAAAGCTTCAAGTACTATTCTTAGTGTAGGAGCGACAGCAAATACTGCACAAAAAGCCG
CTGATATGTCAAATTATGTTATTCAAGCATATAAAAACAAATATTTAAAATCTGACGGACGTTTACGTATAGAACAATTG
TCTAAAGCCAAAGCTATGTATGCAACAAAGAGTGAGCCTGATTACATGAAGTTCATTAAAAATGGTGCGCTAATTGGGGC
CATATTAGCCTACTTAGTCTGCTTAGTTTTATACTTTAGAAAAAGAAATAGCAAGAGTAAGTAG

Upstream 100 bases:

>100_bases
CTAATTGTTTGTGTTAGTATATACGCTCTAATTATAAAGACTGTCATTGGAAAAGTTGTTTTTGGGAAAAAACTTGTCAA
GTATTAAATTTGGAGGAATT

Downstream 100 bases:

>100_bases
AGGTTATATGATTATGCGTATTCTGGTAGTTGGTGATTTTTTAAAGACATCTGGTATGACACGTTATATTTTTAATGTTA
TTGGACGCATTCATGCATCT

Product: exopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKSNFSFLPFFKVLWYRLFWIVLFAVLGGISGYFVERQMFTPQYSVSSTVSVYHVKSKAGSNLDQLNTDVNRLGTVQSEI
GDPGIYANASRLVKENKGTSIPTKYFIEHVSVSAKASSTILSVGATANTAQKAADMSNYVIQAYKNKYLKSDGRLRIEQL
SKAKAMYATKSEPDYMKFIKNGALIGAILAYLVCLVLYFRKRNSKSK

Sequences:

>Translated_207_residues
MKSNFSFLPFFKVLWYRLFWIVLFAVLGGISGYFVERQMFTPQYSVSSTVSVYHVKSKAGSNLDQLNTDVNRLGTVQSEI
GDPGIYANASRLVKENKGTSIPTKYFIEHVSVSAKASSTILSVGATANTAQKAADMSNYVIQAYKNKYLKSDGRLRIEQL
SKAKAMYATKSEPDYMKFIKNGALIGAILAYLVCLVLYFRKRNSKSK
>Mature_207_residues
MKSNFSFLPFFKVLWYRLFWIVLFAVLGGISGYFVERQMFTPQYSVSSTVSVYHVKSKAGSNLDQLNTDVNRLGTVQSEI
GDPGIYANASRLVKENKGTSIPTKYFIEHVSVSAKASSTILSVGATANTAQKAADMSNYVIQAYKNKYLKSDGRLRIEQL
SKAKAMYATKSEPDYMKFIKNGALIGAILAYLVCLVLYFRKRNSKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23138; Mature: 23138

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNFSFLPFFKVLWYRLFWIVLFAVLGGISGYFVERQMFTPQYSVSSTVSVYHVKSKAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
SNLDQLNTDVNRLGTVQSEIGDPGIYANASRLVKENKGTSIPTKYFIEHVSVSAKASSTI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH
LSVGATANTAQKAADMSNYVIQAYKNKYLKSDGRLRIEQLSKAKAMYATKSEPDYMKFIK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
NGALIGAILAYLVCLVLYFRKRNSKSK
CCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSNFSFLPFFKVLWYRLFWIVLFAVLGGISGYFVERQMFTPQYSVSSTVSVYHVKSKAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
SNLDQLNTDVNRLGTVQSEIGDPGIYANASRLVKENKGTSIPTKYFIEHVSVSAKASSTI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHH
LSVGATANTAQKAADMSNYVIQAYKNKYLKSDGRLRIEQLSKAKAMYATKSEPDYMKFIK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
NGALIGAILAYLVCLVLYFRKRNSKSK
CCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA