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The map label for this gene is lys [C]

Identifier: 28377935

GI number: 28377935

Start: 1057234

End: 1058010

Strand: Direct

Name: lys [C]

Synonym: lp_1158

Alternate gene names: 28377935

Gene position: 1057234-1058010 (Clockwise)

Preceding gene: 28377934

Following gene: 28377937

Centisome position: 31.96

GC content: 48.65

Gene sequence:

>777_bases
ATGACAAAGCGGCAACATTATCGACCAGTATACGCAAAAACGCGGTGGGCGCGGTGGCGTTATCGACTGGGCTGGTTATT
AGTTCTATTAGTAATCATTGGCAGCGTTTGGGGCGGCTTGGCTTGGTTACGTTGGCGTAGTGACGCTGTCGTGAGTGGGT
TTGATGTCCGTGGGGTTGCTGTGTCACAAAATGACGGTTATTTAGATTTTGCGGCCTTGCAAAATGATGGGCTCAAGTTT
GTCTATTTACACGCTACTCAAGGAGCTAGTTATACGGATGATAACTTTGCAAGCAATTATGAACGAATCGTTGGCACAAG
TTTAGGTGTTGGCGTAATCCATACGTTTAGTTTTTCATCGACTGCTGCGGCCCAAGCGGACTATTTCGAGAAAACGGTCG
GGGATAGCATCGGCAATTTACCAATTGCGATTCAAGTGCAATACTACGGTGACTACACGGACCAGACGATTGCGGTCCGA
AAAAGTCGTGCCAAGCTTAAGGCATTAGTGACCACGTTGACCCAGGATTATAATCGCTCCTGCGTCGTATGGTCAACGCC
CGCAGTTGCCAAGCAGATCGTTAAGCCCGCACTAAAAGACACTGACTTATGGCTGGACACGGCGAAGACCCACCAACAGG
GACGACGAGTGATGTTTATGCATTATTCCGATCGCGCCGTTTACCGCCAGAACGGGACTCGTCAAGAGTTCGCTGGAATT
CTATTCAACGGTAGTGTGACAGCGTACAATAAAGTTGTGGCGCAGGGCTTAAATTAA

Upstream 100 bases:

>100_bases
TCATGGCAATATCGAAATGGCAGAAAGTCTTGGCCGGGTTCGCGAGGCCATTAGTCAAACACGAACGGAGCTTTAATGCT
GTAGGCAAAGGATTGATGAG

Downstream 100 bases:

>100_bases
GGCCTAATCCTTGAATAATTTATTTCGCAAATCAAATTAACAGTTTATTAGCTGCTAGGCTGACTAAAAATAAGTCGCAA
GTTCAAGACTCTTCTTGAAC

Product: lysozyme (putative)

Products: NA

Alternate protein names: Lysozyme; Cell-Wall Lytic; Glycosy Hydrolase Family Protein; 1 4-Beta-N-Acetylmuramidase; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosyl Hydrolase; Cell-Wall Lytic Muramidase Protein; Extracellular Glycosyl Hydrolase; Glycosyl Transferase

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTKRQHYRPVYAKTRWARWRYRLGWLLVLLVIIGSVWGGLAWLRWRSDAVVSGFDVRGVAVSQNDGYLDFAALQNDGLKF
VYLHATQGASYTDDNFASNYERIVGTSLGVGVIHTFSFSSTAAAQADYFEKTVGDSIGNLPIAIQVQYYGDYTDQTIAVR
KSRAKLKALVTTLTQDYNRSCVVWSTPAVAKQIVKPALKDTDLWLDTAKTHQQGRRVMFMHYSDRAVYRQNGTRQEFAGI
LFNGSVTAYNKVVAQGLN

Sequences:

>Translated_258_residues
MTKRQHYRPVYAKTRWARWRYRLGWLLVLLVIIGSVWGGLAWLRWRSDAVVSGFDVRGVAVSQNDGYLDFAALQNDGLKF
VYLHATQGASYTDDNFASNYERIVGTSLGVGVIHTFSFSSTAAAQADYFEKTVGDSIGNLPIAIQVQYYGDYTDQTIAVR
KSRAKLKALVTTLTQDYNRSCVVWSTPAVAKQIVKPALKDTDLWLDTAKTHQQGRRVMFMHYSDRAVYRQNGTRQEFAGI
LFNGSVTAYNKVVAQGLN
>Mature_257_residues
TKRQHYRPVYAKTRWARWRYRLGWLLVLLVIIGSVWGGLAWLRWRSDAVVSGFDVRGVAVSQNDGYLDFAALQNDGLKFV
YLHATQGASYTDDNFASNYERIVGTSLGVGVIHTFSFSSTAAAQADYFEKTVGDSIGNLPIAIQVQYYGDYTDQTIAVRK
SRAKLKALVTTLTQDYNRSCVVWSTPAVAKQIVKPALKDTDLWLDTAKTHQQGRRVMFMHYSDRAVYRQNGTRQEFAGIL
FNGSVTAYNKVVAQGLN

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29028; Mature: 28897

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRQHYRPVYAKTRWARWRYRLGWLLVLLVIIGSVWGGLAWLRWRSDAVVSGFDVRGVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCEEEEEE
VSQNDGYLDFAALQNDGLKFVYLHATQGASYTDDNFASNYERIVGTSLGVGVIHTFSFSS
EECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
TAAAQADYFEKTVGDSIGNLPIAIQVQYYGDYTDQTIAVRKSRAKLKALVTTLTQDYNRS
CHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCE
CVVWSTPAVAKQIVKPALKDTDLWLDTAKTHQQGRRVMFMHYSDRAVYRQNGTRQEFAGI
EEEEECHHHHHHHHHHHCCCCHHEEECHHHHHCCCEEEEEEECCCEEECCCCCHHHHCEE
LFNGSVTAYNKVVAQGLN
EECCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TKRQHYRPVYAKTRWARWRYRLGWLLVLLVIIGSVWGGLAWLRWRSDAVVSGFDVRGVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCEEEEEE
VSQNDGYLDFAALQNDGLKFVYLHATQGASYTDDNFASNYERIVGTSLGVGVIHTFSFSS
EECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
TAAAQADYFEKTVGDSIGNLPIAIQVQYYGDYTDQTIAVRKSRAKLKALVTTLTQDYNRS
CHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCE
CVVWSTPAVAKQIVKPALKDTDLWLDTAKTHQQGRRVMFMHYSDRAVYRQNGTRQEFAGI
EEEEECHHHHHHHHHHHCCCCHHEEECHHHHHCCCEEEEEEECCCEEECCCCCHHHHCEE
LFNGSVTAYNKVVAQGLN
EECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA