| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is plnX
Identifier: 28377333
GI number: 28377333
Start: 383216
End: 383443
Strand: Direct
Name: plnX
Synonym: lp_0430
Alternate gene names: NA
Gene position: 383216-383443 (Clockwise)
Preceding gene: 28377332
Following gene: 28377334
Centisome position: 11.58
GC content: 35.96
Gene sequence:
>228_bases TTGCCACCAACCATTCAGCAATTAGCATTGCGAAAATTACTAATGATTGATCATGCGGAAACAATTAATGATTTGAGCCT ACCGCCTGCCAATCACTTGGAAAAATTAAGTCATGATCGCCAAGGGCAATATAGCATCAGGATTAATAATCAGTATCGGA TATGTTTTGCAATTCGAAATGGTAATGAGTTTTATGATGTTGAAATAGTCGATTATCATCATGGTTAG
Upstream 100 bases:
>100_bases TCGGATGGATTGAGATATACACGTGATACGGGTATAATCGATTAAGAATTTTGCAGATAAGGAAACTCACAAGGTTTACC AACAAAAATTCTCTAAACAA
Downstream 100 bases:
>100_bases GAGACCAAAAAATGAATGAAATCCCAACACCTAAAATTAGTGAAATTCTTGAAGAAGAGTTTATGGCTCCCTTGCATATC TCTGCATATTTTTTGGCTCA
Product: plantaricin biosynthesis protein PlnX (putative)
Products: NA
Alternate protein names: Plasmid Maintenance System Killer Protein; Killer Protein; Plasmid Maintenance System Killer Family Protein; Xin-Antitoxin System Toxin Component RelE Family; Xin HigB; Proteic Killer Protein; Plantaricin Biosynthesis Protein PlnX; Xin Of Plasmid Maintenance System
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPPTIQQLALRKLLMIDHAETINDLSLPPANHLEKLSHDRQGQYSIRINNQYRICFAIRNGNEFYDVEIVDYHHG
Sequences:
>Translated_75_residues MPPTIQQLALRKLLMIDHAETINDLSLPPANHLEKLSHDRQGQYSIRINNQYRICFAIRNGNEFYDVEIVDYHHG >Mature_74_residues PPTIQQLALRKLLMIDHAETINDLSLPPANHLEKLSHDRQGQYSIRINNQYRICFAIRNGNEFYDVEIVDYHHG
Specific function: Unknown
COG id: COG3549
COG function: function code R; Plasmid maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8787; Mature: 8656
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTIQQLALRKLLMIDHAETINDLSLPPANHLEKLSHDRQGQYSIRINNQYRICFAIRN CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEECC GNEFYDVEIVDYHHG CCEEEEEEEEEEECC >Mature Secondary Structure PPTIQQLALRKLLMIDHAETINDLSLPPANHLEKLSHDRQGQYSIRINNQYRICFAIRN CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEECC GNEFYDVEIVDYHHG CCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA