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The map label for this gene is yidA [H]

Identifier: 28377306

GI number: 28377306

Start: 361057

End: 361872

Strand: Direct

Name: yidA [H]

Synonym: lp_0397

Alternate gene names: 28377306

Gene position: 361057-361872 (Clockwise)

Preceding gene: 28377301

Following gene: 28377307

Centisome position: 10.91

GC content: 49.88

Gene sequence:

>816_bases
ATGACAATTAAATTAATTGCGATTGATATTGATGACACGCTTCTGGATTCAAAGGGGCAATTATTACCAAGTACGATTGC
GGCAGTTAAGGAAGCCCACGACCAAGGGATTAAGGTGGTTTTGTGTACCGGCCGGCCACTTGCTGGGGCGCAACATTATT
TAGATGCGTTAGGCCTTGCTGGTGATGACCAGTACGTGATTACGTATAACGGTGCTGTAATCGAGAGCATTGCTGGCCGG
ATCGTCGCCAAACATTTAGTGGATAATGCGCACTATCGGCAATTAACCGCGTTTGGAAAACAACATCACGTGCCCTTTAA
CGTGCTCGATGCGGACAGTACGATCTATACAGCTGACCGCGATGTTAACTGGGTCACAGTTGTACAGGCGTGGGAAAACA
AAGCTGGGCTGTTGATTCGAGACCCTGACGATTTACCAGCTGATTTTCAAATTGCCAAGGGGGTCTTTGTAGGTGAAGGC
CCGCAACTCGATGCCGTAGAAGCGCAAGTTAAGACGACTTTTGGTCGGGACCTGTACGTGGTACGTGCGGCAACTAACTT
CTTGGAACTGATGCATACTGGTGTCAACAAGGGGCAGGCAGTTCAGGATTTAGCGGCAGCTCTGGAAATACAACCGGACG
AAGTGATGGCACTGGGAGACGAACAGAATGATCTGCCAATGTTTGCTTTCGCCGGAACAGCTGTCGCGATGGGCAATGGC
AGTGATATTGCTAAGGCACACGCTGATCACGTGACGGCTACTAATGATGCGAACGGGGTCGCAGCTGCGATTCGGCAGTG
GGCATTATCGGATTAA

Upstream 100 bases:

>100_bases
TGATGGCTGACGCGCTATGCTATATTAGAATTATAGTTCGCGATGAGCGGTGGCATGACTTAATTGTAACCGTATTCGCA
GTTGAAAGGAACGAAAACCC

Downstream 100 bases:

>100_bases
CTCGGATGATTATTTTTAGCGAAACAGTTGACAAGACTACGCAATGAGTTTATGATTGCAAATATTAAAAATAAATGAGA
CTAAACGTGATGATCAGGAG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTIKLIAIDIDDTLLDSKGQLLPSTIAAVKEAHDQGIKVVLCTGRPLAGAQHYLDALGLAGDDQYVITYNGAVIESIAGR
IVAKHLVDNAHYRQLTAFGKQHHVPFNVLDADSTIYTADRDVNWVTVVQAWENKAGLLIRDPDDLPADFQIAKGVFVGEG
PQLDAVEAQVKTTFGRDLYVVRAATNFLELMHTGVNKGQAVQDLAAALEIQPDEVMALGDEQNDLPMFAFAGTAVAMGNG
SDIAKAHADHVTATNDANGVAAAIRQWALSD

Sequences:

>Translated_271_residues
MTIKLIAIDIDDTLLDSKGQLLPSTIAAVKEAHDQGIKVVLCTGRPLAGAQHYLDALGLAGDDQYVITYNGAVIESIAGR
IVAKHLVDNAHYRQLTAFGKQHHVPFNVLDADSTIYTADRDVNWVTVVQAWENKAGLLIRDPDDLPADFQIAKGVFVGEG
PQLDAVEAQVKTTFGRDLYVVRAATNFLELMHTGVNKGQAVQDLAAALEIQPDEVMALGDEQNDLPMFAFAGTAVAMGNG
SDIAKAHADHVTATNDANGVAAAIRQWALSD
>Mature_270_residues
TIKLIAIDIDDTLLDSKGQLLPSTIAAVKEAHDQGIKVVLCTGRPLAGAQHYLDALGLAGDDQYVITYNGAVIESIAGRI
VAKHLVDNAHYRQLTAFGKQHHVPFNVLDADSTIYTADRDVNWVTVVQAWENKAGLLIRDPDDLPADFQIAKGVFVGEGP
QLDAVEAQVKTTFGRDLYVVRAATNFLELMHTGVNKGQAVQDLAAALEIQPDEVMALGDEQNDLPMFAFAGTAVAMGNGS
DIAKAHADHVTATNDANGVAAAIRQWALSD

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=271, Percent_Identity=36.90036900369, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1786982, Length=288, Percent_Identity=26.0416666666667, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28980; Mature: 28849

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKLIAIDIDDTLLDSKGQLLPSTIAAVKEAHDQGIKVVLCTGRPLAGAQHYLDALGLA
CEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC
GDDQYVITYNGAVIESIAGRIVAKHLVDNAHYRQLTAFGKQHHVPFNVLDADSTIYTADR
CCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCEEEECCC
DVNWVTVVQAWENKAGLLIRDPDDLPADFQIAKGVFVGEGPQLDAVEAQVKTTFGRDLYV
CCCEEEEEEECCCCCCEEEECCCCCCCCEEEECEEEECCCCCCCHHHHHHHHHCCCCEEE
VRAATNFLELMHTGVNKGQAVQDLAAALEIQPDEVMALGDEQNDLPMFAFAGTAVAMGNG
EEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHEEEECCCCCCCCEEEECCEEEEECCC
SDIAKAHADHVTATNDANGVAAAIRQWALSD
CHHHHHHCCCEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKLIAIDIDDTLLDSKGQLLPSTIAAVKEAHDQGIKVVLCTGRPLAGAQHYLDALGLA
EEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC
GDDQYVITYNGAVIESIAGRIVAKHLVDNAHYRQLTAFGKQHHVPFNVLDADSTIYTADR
CCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCEEEECCC
DVNWVTVVQAWENKAGLLIRDPDDLPADFQIAKGVFVGEGPQLDAVEAQVKTTFGRDLYV
CCCEEEEEEECCCCCCEEEECCCCCCCCEEEECEEEECCCCCCCHHHHHHHHHCCCCEEE
VRAATNFLELMHTGVNKGQAVQDLAAALEIQPDEVMALGDEQNDLPMFAFAGTAVAMGNG
EEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHEEEECCCCCCCCEEEECCEEEEECCC
SDIAKAHADHVTATNDANGVAAAIRQWALSD
CHHHHHHCCCEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]