Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377197

Identifier: 28377197

GI number: 28377197

Start: 248456

End: 248866

Strand: Direct

Name: 28377197

Synonym: lp_0272

Alternate gene names: NA

Gene position: 248456-248866 (Clockwise)

Preceding gene: 28377196

Following gene: 28377199

Centisome position: 7.51

GC content: 48.91

Gene sequence:

>411_bases
ATGGCAACTTTTACGACTGAGCAGGCCGGGTATCAAATGCAAGCAATACTCCAAGTGATTGGATATGACTTGTTGATCGT
CGTTACCGGTGGGACCAATCCCCATATTGGTGACGTGACCACACTAACTGCCAGCACGGTTCCCGAAACGGTTAAGTTTC
CCAGCCATGATGGTCGCTTCCACAAAGATAACTTTATTTCGGAACGAATGGCCAAGCGGATTCAGCGTTATCTAGCTGGA
AGCTGTACAATTACTGCGGGAATTCATGTCAACCAAATTACTAAAGCACAAATAGCAGCTGCGGCACCAATGACGGATGA
CCTCAGCCGCCAGATTATTAGCTGGTTACAGGCCCATCCCGTCCAGGCTGAAAAGCCGGAATATTATGGACAAGACGAGC
AACCGCGGTAG

Upstream 100 bases:

>100_bases
CGCAATCCATTCAGGATCTGGTCAATCATCAAACCATGAAAATTTTAGATGCGTTTCATATTCATAATGAAACTGATCGC
CGTTGGGAGGGGGATTAAGT

Downstream 100 bases:

>100_bases
ATTCGTGACGCATGGGGTGTCGAAAACAGCGCAATATTGTCTTTGCGCCCTATTGCTGGATAATATGCACCGAGCTGGCC
GTTTATTGTTATTAAAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MATFTTEQAGYQMQAILQVIGYDLLIVVTGGTNPHIGDVTTLTASTVPETVKFPSHDGRFHKDNFISERMAKRIQRYLAG
SCTITAGIHVNQITKAQIAAAAPMTDDLSRQIISWLQAHPVQAEKPEYYGQDEQPR

Sequences:

>Translated_136_residues
MATFTTEQAGYQMQAILQVIGYDLLIVVTGGTNPHIGDVTTLTASTVPETVKFPSHDGRFHKDNFISERMAKRIQRYLAG
SCTITAGIHVNQITKAQIAAAAPMTDDLSRQIISWLQAHPVQAEKPEYYGQDEQPR
>Mature_135_residues
ATFTTEQAGYQMQAILQVIGYDLLIVVTGGTNPHIGDVTTLTASTVPETVKFPSHDGRFHKDNFISERMAKRIQRYLAGS
CTITAGIHVNQITKAQIAAAAPMTDDLSRQIISWLQAHPVQAEKPEYYGQDEQPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15030; Mature: 14899

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFTTEQAGYQMQAILQVIGYDLLIVVTGGTNPHIGDVTTLTASTVPETVKFPSHDGRF
CCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
HKDNFISERMAKRIQRYLAGSCTITAGIHVNQITKAQIAAAAPMTDDLSRQIISWLQAHP
CCHHHHHHHHHHHHHHHHCCCCEEEECCEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
VQAEKPEYYGQDEQPR
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATFTTEQAGYQMQAILQVIGYDLLIVVTGGTNPHIGDVTTLTASTVPETVKFPSHDGRF
CCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
HKDNFISERMAKRIQRYLAGSCTITAGIHVNQITKAQIAAAAPMTDDLSRQIISWLQAHP
CCHHHHHHHHHHHHHHHHCCCCEEEECCEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
VQAEKPEYYGQDEQPR
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA