| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is malF [H]
Identifier: 28377116
GI number: 28377116
Start: 152585
End: 153874
Strand: Direct
Name: malF [H]
Synonym: lp_0176
Alternate gene names: 28377116
Gene position: 152585-153874 (Clockwise)
Preceding gene: 28377115
Following gene: 28377117
Centisome position: 4.61
GC content: 41.71
Gene sequence:
>1290_bases ATGCAAGTCAAGGATGTAAAGAAAGCGCAACGCCTGTCAATTATTCCCGGGCTCGGTCAGCTGTATAACGGTCAGACCAT AAAAGGTGTTGGCTTCATTATTATTCTATTGGCATTTATTGCTGAGTTCATCTTCGGGGGCTTTAGCGCATTTGCCAATT TAGTCACATTGGGTTCAGTCTCAATGGAAGACAACTCTTTGTTCATGATGATCTATGGGACGTTGCAGATTCTATTGACA ATTGTGTTTATCGTATTTTATATTGCAAACCTTTACGATGCGAAACACGTTGCACAGTTAATTAATAATGGTAAAAAGGT CTCCCATACGTTTAAAGAGTTAGGTGCGAGTTTAGTAGATGGTGGCTTTGCTTATTTATTAACCACACCGGCCTATATTT TAATGGTTTTTACGATTGTGTTCCCAGTATTGGTTACACTACTGATGGCTTTTACGAACTATGATTTTGCGCATATTCCA CCAGCTATGTTATTGGATTGGATTGGGTTCAAAAACTTCACATCAATGTTCTTCTTGAGTAGTTACCGGGCAACCTTCAA CGCTGTTTTTGGTTGGACCGTTATTTGGACCGTATGTGCAACCACGTTACAAATTATTATTGGGATTGCCACCGCAGTAA TTGCTAATCAAAACTTCATCAAAGGTAAGCGCTTCTTCGGAGTGATTTTCTTGCTTCCTTGGGCGATTCCAGCGTTTGTA TCAATTATGAGTTTTTCAAACATTTTTAATGATTCAGCTGGTGCGATCAATGTGCAGGTCATCGGCTTATGGAATACGTT AGTTCCATTTGCTCACATTGCGCCGATCCACTGGATGACGGATACGTTCTGGACTAAAGTTGCTATTATTATGATTCAAG GTTGGTTAGGATTCCCGTACATTTACGTTATGATTACTGGTATACTGCAAGCGATTCCAGAAGATCTCTACGAAGCCGCA ACGCTAGATGGTGCGACAGTAATGCAAAAGTTCAACAAGATTACGTTGCCAACGATTTTTGCTATTGCAGCGCCAATCTT TGTGACGCAGTATACGTTTAACTTCAATAACTTCTCGATGATCTATCTGTTTAACCAAGGTGGCCCTGGTGATGTCGGTG CTAACGCCGGTGGGACGGATATCCTGATCTCATGGATCTACAAGTTAACAACGGGGACGTCACCACAGTATTCATTGGCC GCGGCCGTTACGTTGATTATTTCCGTCTTAGTTATCGGGATCTCATTGATTGTCTTCAAGAAGACCCACGCGTTTGAAAT GGGGGACTAG
Upstream 100 bases:
>100_bases TAATTTAAGGGGGCTGAAACAAAATTCGTTTTGTCTCAGCCTTTTTAAAAGGAAAAATGCACGATATTTAGAATTTATTT AGGAAAGGGGTGCGGGCGAC
Downstream 100 bases:
>100_bases TGTTATGGATAATGCACAAGCAGTGGCACCTAAGAATGCCAATTCAAAGCAAAATAGCGCGCGTCGGCACCGTTTCTGGA AAGAATTCTTTACGTATCTG
Product: maltose/maltodextrin ABC transporter, permease protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MQVKDVKKAQRLSIIPGLGQLYNGQTIKGVGFIIILLAFIAEFIFGGFSAFANLVTLGSVSMEDNSLFMMIYGTLQILLT IVFIVFYIANLYDAKHVAQLINNGKKVSHTFKELGASLVDGGFAYLLTTPAYILMVFTIVFPVLVTLLMAFTNYDFAHIP PAMLLDWIGFKNFTSMFFLSSYRATFNAVFGWTVIWTVCATTLQIIIGIATAVIANQNFIKGKRFFGVIFLLPWAIPAFV SIMSFSNIFNDSAGAINVQVIGLWNTLVPFAHIAPIHWMTDTFWTKVAIIMIQGWLGFPYIYVMITGILQAIPEDLYEAA TLDGATVMQKFNKITLPTIFAIAAPIFVTQYTFNFNNFSMIYLFNQGGPGDVGANAGGTDILISWIYKLTTGTSPQYSLA AAVTLIISVLVIGISLIVFKKTHAFEMGD
Sequences:
>Translated_429_residues MQVKDVKKAQRLSIIPGLGQLYNGQTIKGVGFIIILLAFIAEFIFGGFSAFANLVTLGSVSMEDNSLFMMIYGTLQILLT IVFIVFYIANLYDAKHVAQLINNGKKVSHTFKELGASLVDGGFAYLLTTPAYILMVFTIVFPVLVTLLMAFTNYDFAHIP PAMLLDWIGFKNFTSMFFLSSYRATFNAVFGWTVIWTVCATTLQIIIGIATAVIANQNFIKGKRFFGVIFLLPWAIPAFV SIMSFSNIFNDSAGAINVQVIGLWNTLVPFAHIAPIHWMTDTFWTKVAIIMIQGWLGFPYIYVMITGILQAIPEDLYEAA TLDGATVMQKFNKITLPTIFAIAAPIFVTQYTFNFNNFSMIYLFNQGGPGDVGANAGGTDILISWIYKLTTGTSPQYSLA AAVTLIISVLVIGISLIVFKKTHAFEMGD >Mature_429_residues MQVKDVKKAQRLSIIPGLGQLYNGQTIKGVGFIIILLAFIAEFIFGGFSAFANLVTLGSVSMEDNSLFMMIYGTLQILLT IVFIVFYIANLYDAKHVAQLINNGKKVSHTFKELGASLVDGGFAYLLTTPAYILMVFTIVFPVLVTLLMAFTNYDFAHIP PAMLLDWIGFKNFTSMFFLSSYRATFNAVFGWTVIWTVCATTLQIIIGIATAVIANQNFIKGKRFFGVIFLLPWAIPAFV SIMSFSNIFNDSAGAINVQVIGLWNTLVPFAHIAPIHWMTDTFWTKVAIIMIQGWLGFPYIYVMITGILQAIPEDLYEAA TLDGATVMQKFNKITLPTIFAIAAPIFVTQYTFNFNNFSMIYLFNQGGPGDVGANAGGTDILISWIYKLTTGTSPQYSLA AAVTLIISVLVIGISLIVFKKTHAFEMGD
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=35.1351351351351, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1787570, Length=233, Percent_Identity=24.8927038626609, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 47331; Mature: 47331
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKDVKKAQRLSIIPGLGQLYNGQTIKGVGFIIILLAFIAEFIFGGFSAFANLVTLGSV CCCCHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SMEDNSLFMMIYGTLQILLTIVFIVFYIANLYDAKHVAQLINNGKKVSHTFKELGASLVD EECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GGFAYLLTTPAYILMVFTIVFPVLVTLLMAFTNYDFAHIPPAMLLDWIGFKNFTSMFFLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCHHHHHHHHHHH SYRATFNAVFGWTVIWTVCATTLQIIIGIATAVIANQNFIKGKRFFGVIFLLPWAIPAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHH SIMSFSNIFNDSAGAINVQVIGLWNTLVPFAHIAPIHWMTDTFWTKVAIIMIQGWLGFPY HHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IYVMITGILQAIPEDLYEAATLDGATVMQKFNKITLPTIFAIAAPIFVTQYTFNFNNFSM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCEEE IYLFNQGGPGDVGANAGGTDILISWIYKLTTGTSPQYSLAAAVTLIISVLVIGISLIVFK EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE KTHAFEMGD CCCCCCCCC >Mature Secondary Structure MQVKDVKKAQRLSIIPGLGQLYNGQTIKGVGFIIILLAFIAEFIFGGFSAFANLVTLGSV CCCCHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SMEDNSLFMMIYGTLQILLTIVFIVFYIANLYDAKHVAQLINNGKKVSHTFKELGASLVD EECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GGFAYLLTTPAYILMVFTIVFPVLVTLLMAFTNYDFAHIPPAMLLDWIGFKNFTSMFFLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCHHHHHHHHHHH SYRATFNAVFGWTVIWTVCATTLQIIIGIATAVIANQNFIKGKRFFGVIFLLPWAIPAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHH SIMSFSNIFNDSAGAINVQVIGLWNTLVPFAHIAPIHWMTDTFWTKVAIIMIQGWLGFPY HHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IYVMITGILQAIPEDLYEAATLDGATVMQKFNKITLPTIFAIAAPIFVTQYTFNFNNFSM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCEEE IYLFNQGGPGDVGANAGGTDILISWIYKLTTGTSPQYSLAAAVTLIISVLVIGISLIVFK EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE KTHAFEMGD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]