| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377096
Identifier: 28377096
GI number: 28377096
Start: 132901
End: 133230
Strand: Direct
Name: 28377096
Synonym: lp_0154
Alternate gene names: NA
Gene position: 132901-133230 (Clockwise)
Preceding gene: 28377095
Following gene: 28377097
Centisome position: 4.02
GC content: 42.42
Gene sequence:
>330_bases ATGCCAGCTAACTTTTATCAACGATTAATTGATAAGTATGAACCAATGACGGAAGCAGCGTTCTTAGTGTTAGTCAGTGT TCGCCAGCCGATTACCAGTGAAGCGATTCCGGCAAAAATCGCTGAAATGACCAATAATCAACTACAGCTAGGATTAGGAA CCTTATTTACGAATTTGCATGCCATGACGAAGGATTATTTAATGACGGAACGAGTCGACGAAAATGACGTGCATACCTAT GAAATCACGGGGAGTGGTGAATCGGTTTTGGCGGCTGAACGAAAACGACTGCAATTATTGAATCAGATTTGTGAGCAGGC GGGATTGTAA
Upstream 100 bases:
>100_bases GAAATTATTCTGGGGAGTTGCATTCAAGAAAACGGTGGCCCATAATTAAATTGATTGAAAAAGAAAGCGCTTCAATAATC TGATTAAGGGGGATGAAAAT
Downstream 100 bases:
>100_bases CGGGTTAATTTAACGGGGAAGTGAGTATATGTGGCGTTATCAAATGGCGGTCAAAGGCTCAGAGCAGGAATTGCGGTGGC TCAATCAGCAGGCACAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPANFYQRLIDKYEPMTEAAFLVLVSVRQPITSEAIPAKIAEMTNNQLQLGLGTLFTNLHAMTKDYLMTERVDENDVHTY EITGSGESVLAAERKRLQLLNQICEQAGL
Sequences:
>Translated_109_residues MPANFYQRLIDKYEPMTEAAFLVLVSVRQPITSEAIPAKIAEMTNNQLQLGLGTLFTNLHAMTKDYLMTERVDENDVHTY EITGSGESVLAAERKRLQLLNQICEQAGL >Mature_108_residues PANFYQRLIDKYEPMTEAAFLVLVSVRQPITSEAIPAKIAEMTNNQLQLGLGTLFTNLHAMTKDYLMTERVDENDVHTYE ITGSGESVLAAERKRLQLLNQICEQAGL
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12273; Mature: 12142
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANFYQRLIDKYEPMTEAAFLVLVSVRQPITSEAIPAKIAEMTNNQLQLGLGTLFTNLH CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH AMTKDYLMTERVDENDVHTYEITGSGESVLAAERKRLQLLNQICEQAGL HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PANFYQRLIDKYEPMTEAAFLVLVSVRQPITSEAIPAKIAEMTNNQLQLGLGTLFTNLH CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH AMTKDYLMTERVDENDVHTYEITGSGESVLAAERKRLQLLNQICEQAGL HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA