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The map label for this gene is ptp1

Identifier: 28377031

GI number: 28377031

Start: 67605

End: 68351

Strand: Direct

Name: ptp1

Synonym: lp_0069

Alternate gene names: NA

Gene position: 67605-68351 (Clockwise)

Preceding gene: 28377030

Following gene: 28377035

Centisome position: 2.04

GC content: 45.92

Gene sequence:

>747_bases
ATGGAAGGGATTACTAATTTACGGTCACTAGGTGGTTATCGCAATAAAAATCAGCAAGTAATCAAAGATGGTTTAATTTA
CCGGTCAGGACAATTGGATCAATTAACACCGGCACAGACGCAGTATCTAGCAACCACGCTTGGCATTACGCGAATCGTGG
ACATGCGTAGTGCTGATGAGCGTCATCAATTTCCAGATGCGACATGGCCACACGTCCAGTATCACGTGCTGGATGTGCTA
GCACAAGTCATGACGAACGACGCAAGTTTACAATCGATGATTAGTAGTACGGGGGCGGTCCATGACCGCATGGTTCAGTT
ATATGAACAGCTAGCGTTAGATCCTACTGCCCGTCAAAGTTATTGTCAATTTATACGGCTACTACTGGTTCCAGATCAGC
CACTACTGTTCCATTGTTTTGCCGGTAAGGATCGCACCGGCGTCGGGGCCGCCTTATTTCTAAAAATTTTGGGTATTAGT
GACGAGCAAATCATGGCTGACTATCTGCTCACAAATCAAGCACGTGCAGCTGCTAATCAACAAATCTTGGCGACGATGGC
GTCGCAATTATCTGATGAGCAACAACGGGCCGTGAACCAGGCATTATTAGTAGACGCTGATTACCTGAGCCATTACTTTG
AAGTCATCAAAGCCCGGTACGACACATTTTCAAATTACTTGCAGACGGGTCTAGGGCTGACCTCAGCGGAATGTCAACAG
TTACGCGAATTATATTTGACTAAATAG

Upstream 100 bases:

>100_bases
GTTAGGTCTGGTGACTAAATGACTTTTTAAATGGCCTTTGACTGAAAATTTAACGGTGACAGTTTACAATTAAGTTATCA
ATCTAGCAGGGGGCTTGGTC

Downstream 100 bases:

>100_bases
TCAATAATATAAAGGCGCAAAAAATCACACCAATACTCACTTAAGGACTAACCTGGGTATTGGTGTGATTACTTATTCAT
GGGTGTTTGCGTTGTCCGCT

Product: protein-tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEGITNLRSLGGYRNKNQQVIKDGLIYRSGQLDQLTPAQTQYLATTLGITRIVDMRSADERHQFPDATWPHVQYHVLDVL
AQVMTNDASLQSMISSTGAVHDRMVQLYEQLALDPTARQSYCQFIRLLLVPDQPLLFHCFAGKDRTGVGAALFLKILGIS
DEQIMADYLLTNQARAAANQQILATMASQLSDEQQRAVNQALLVDADYLSHYFEVIKARYDTFSNYLQTGLGLTSAECQQ
LRELYLTK

Sequences:

>Translated_248_residues
MEGITNLRSLGGYRNKNQQVIKDGLIYRSGQLDQLTPAQTQYLATTLGITRIVDMRSADERHQFPDATWPHVQYHVLDVL
AQVMTNDASLQSMISSTGAVHDRMVQLYEQLALDPTARQSYCQFIRLLLVPDQPLLFHCFAGKDRTGVGAALFLKILGIS
DEQIMADYLLTNQARAAANQQILATMASQLSDEQQRAVNQALLVDADYLSHYFEVIKARYDTFSNYLQTGLGLTSAECQQ
LRELYLTK
>Mature_248_residues
MEGITNLRSLGGYRNKNQQVIKDGLIYRSGQLDQLTPAQTQYLATTLGITRIVDMRSADERHQFPDATWPHVQYHVLDVL
AQVMTNDASLQSMISSTGAVHDRMVQLYEQLALDPTARQSYCQFIRLLLVPDQPLLFHCFAGKDRTGVGAALFLKILGIS
DEQIMADYLLTNQARAAANQQILATMASQLSDEQQRAVNQALLVDADYLSHYFEVIKARYDTFSNYLQTGLGLTSAECQQ
LRELYLTK

Specific function: Unknown

COG id: COG2365

COG function: function code T; Protein tyrosine/serine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR016130 [H]

Pfam domain/function: NA

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 27895; Mature: 27895

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGITNLRSLGGYRNKNQQVIKDGLIYRSGQLDQLTPAQTQYLATTLGITRIVDMRSADE
CCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
RHQFPDATWPHVQYHVLDVLAQVMTNDASLQSMISSTGAVHDRMVQLYEQLALDPTARQS
HHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YCQFIRLLLVPDQPLLFHCFAGKDRTGVGAALFLKILGISDEQIMADYLLTNQARAAANQ
HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QILATMASQLSDEQQRAVNQALLVDADYLSHYFEVIKARYDTFSNYLQTGLGLTSAECQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LRELYLTK
HHHHHCCC
>Mature Secondary Structure
MEGITNLRSLGGYRNKNQQVIKDGLIYRSGQLDQLTPAQTQYLATTLGITRIVDMRSADE
CCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
RHQFPDATWPHVQYHVLDVLAQVMTNDASLQSMISSTGAVHDRMVQLYEQLALDPTARQS
HHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YCQFIRLLLVPDQPLLFHCFAGKDRTGVGAALFLKILGISDEQIMADYLLTNQARAAANQ
HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QILATMASQLSDEQQRAVNQALLVDADYLSHYFEVIKARYDTFSNYLQTGLGLTSAECQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LRELYLTK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8405966 [H]