| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is cotI [H]
Identifier: 28211636
GI number: 28211636
Start: 2142648
End: 2143715
Strand: Direct
Name: cotI [H]
Synonym: CTC02013
Alternate gene names: 28211636
Gene position: 2142648-2143715 (Clockwise)
Preceding gene: 28211627
Following gene: 28211665
Centisome position: 76.54
GC content: 25.0
Gene sequence:
>1068_bases ATGTCAAGCATTACTAATGCATCTGATTTACAACTTTTGTCTGAAGAAAATGTACGATTAAATGTATTAAAGCATTATAA TCTAGAAAATTCAATAGTAACACAAATAAAATTTAAAAACACTGATAAGCAAAGAGCAGTTTATAAAGTAAGCCATGGCT CTAAAAACTATTGTCTTAAGAAAGTATACTTCCCTGAAGAAGAATTATTATTCGTATATTCAGCTATAGAATGGATGCAT AGATATAATATAAAAGTTCCAAGAATATTGCCTACTTTAGAAAGTAATAGATTTGTTAATTATGAAAATATGTTATTTAT ATTAACTCCATGGATAGAAGGATGTAAATGCGACTATGATAATCCTATTCATGTGACTAGATCCACAGAAAATCTATCTT TAATGCACCATCATTCAAGTAAATTTTTCCCAATACTTGGTAGTGATAATCGTGAGAAATTTGATAATGTTTATGACACT ACAGAAAAACGATTTAATCAACTTTTAGAATGTTCTAATTTAGCTTTTAAATATAAAGATAAATTTTCAAAATACTTTTT AAGTCATTTTGATGCTAATCTAAATACTGCTAAAAACATACTGGCTTTATCTTGTACAATCAATCACAATAATCTTCAAA AAAATTTATGTCATTTAGATTATGTAAATAAAAACATTATATTAGATAATAATAATAACGTTTGGGTTATTGATTTTGAT AAATGTAGAATAGATTACCGTGTACACGATATAGGATACTTCATGAGAAGATATTTGCGTAGGGATAATACCAGTTGGGA TGTTAAAAAAGCCATAGAATGTATAGAAATCTATGAGGGTATAAATCCTTTAAATTTAGATGAACATAAATATATTCTGT GTTATATAGGATTTCCTCAAAAGTTTTGGAAAATATCTAGAGATTATTATAGAAATATAAAAAGATGCAATAAAAATTCT TTCTTCAAAGTTTTAACTAGTTCCATAGAAAAGGAAAAAGAACAAGATGATTTTGTTATTGATTTCTTAAAATATATAGA GGATAAATTTAATATAAAATTATCTTAA
Upstream 100 bases:
>100_bases AATCCATAAGAGTATGTAAGCTTTAATACTAACTATTATGTATATTCCAGGGATCTTTTTAATATTATTATACAGAGATA AATAATAAAGGAGTTTTGTT
Downstream 100 bases:
>100_bases GTATAGATAGGTTAGCTTTTTTATGCTAACCCCTTTATTTTATTAAAAAACAAACGTCAGACAGAGTACTTTTCCATCTG ACGTAAATTTCATTTTATTT
Product: spore coat protein S
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMH RYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDT TEKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNS FFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS
Sequences:
>Translated_355_residues MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMH RYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDT TEKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNS FFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS >Mature_354_residues SSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMHR YNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTT EKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFDK CRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNSF FKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 42572; Mature: 42441
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLK CCCCCCCHHHHEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEE KVYFPEEELLFVYSAIEWMHRYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYD EEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCEEEEEECCCCCCCCCCC NPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTTEKRFNQLLECSNLAFKYKD CCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHEEEECCCEEEEECCCCEEEEEEC KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQ CEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCH KFWKISRDYYRNIKRCNKNSFFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEC >Mature Secondary Structure SSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLK CCCCCCHHHHEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEE KVYFPEEELLFVYSAIEWMHRYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYD EEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCEEEEEECCCCCCCCCCC NPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTTEKRFNQLLECSNLAFKYKD CCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHEEEECCCEEEEECCCCEEEEEEC KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQ CEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCH KFWKISRDYYRNIKRCNKNSFFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]