| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211597
Identifier: 28211597
GI number: 28211597
Start: 2095915
End: 2096358
Strand: Direct
Name: 28211597
Synonym: CTC01971
Alternate gene names: NA
Gene position: 2095915-2096358 (Clockwise)
Preceding gene: 28211596
Following gene: 28211598
Centisome position: 74.87
GC content: 34.91
Gene sequence:
>444_bases ATGAGTCAAAATGTAAACTTTTCACAAAACATGGATACAATATTTTCAGGGTTAAAAGACTTTGTTAAAACAGAAAGTGT TATGGGAACTCCACTTGTTGTTGAGGATAAAACTTTAGTTCCTGTAGTTTCAGTAGCTCTAGGTTATGGTAGTGCAACAG GTAATGCAAAAAATGCACAACCTAACCCCAATTCATCAAATAATGACCCTAACGTTGGTTTAGGAGCTAGAGTAACAACT AACGCTGTAGTAGTTATTGACAAAGGTTCTGTATCAATGTTACCTGTAAATGGCAAAGGAAATATGGGACAATTAATTGA TAAGATACCAGAAATGGTTACTAATATGAGTCCAAATGCTCAACAACAAAATATGGCACAAAACCAACAACAGCAAAACC AACAACAAAATCAACCAGCAGCTTCACCAAAACCTGGTAAATAA
Upstream 100 bases:
>100_bases AAGTTTAAAACTTCAGCTATCATTAAATTATTAAATATAAATAGAAAAAATTATAACAAAAAATTTTCTTATGAAAGTAA ATAAAGGAGGACTTTGAAAA
Downstream 100 bases:
>100_bases TATTAAAACTGTTGAGAATTAATTTTCTCAGCAGTTTTTTATTTTGTACGTAACATTCGTTACAGACCTATACCTTCTAT TTTAATATAATGTACTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSQNVNFSQNMDTIFSGLKDFVKTESVMGTPLVVEDKTLVPVVSVALGYGSATGNAKNAQPNPNSSNNDPNVGLGARVTT NAVVVIDKGSVSMLPVNGKGNMGQLIDKIPEMVTNMSPNAQQQNMAQNQQQQNQQQNQPAASPKPGK
Sequences:
>Translated_147_residues MSQNVNFSQNMDTIFSGLKDFVKTESVMGTPLVVEDKTLVPVVSVALGYGSATGNAKNAQPNPNSSNNDPNVGLGARVTT NAVVVIDKGSVSMLPVNGKGNMGQLIDKIPEMVTNMSPNAQQQNMAQNQQQQNQQQNQPAASPKPGK >Mature_146_residues SQNVNFSQNMDTIFSGLKDFVKTESVMGTPLVVEDKTLVPVVSVALGYGSATGNAKNAQPNPNSSNNDPNVGLGARVTTN AVVVIDKGSVSMLPVNGKGNMGQLIDKIPEMVTNMSPNAQQQNMAQNQQQQNQQQNQPAASPKPGK
Specific function: Unknown
COG id: COG3874
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15526; Mature: 15394
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNVNFSQNMDTIFSGLKDFVKTESVMGTPLVVEDKTLVPVVSVALGYGSATGNAKNAQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC PNPNSSNNDPNVGLGARVTTNAVVVIDKGSVSMLPVNGKGNMGQLIDKIPEMVTNMSPNA CCCCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCH QQQNMAQNQQQQNQQQNQPAASPKPGK HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SQNVNFSQNMDTIFSGLKDFVKTESVMGTPLVVEDKTLVPVVSVALGYGSATGNAKNAQ CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC PNPNSSNNDPNVGLGARVTTNAVVVIDKGSVSMLPVNGKGNMGQLIDKIPEMVTNMSPNA CCCCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCH QQQNMAQNQQQQNQQQNQPAASPKPGK HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA