| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211442
Identifier: 28211442
GI number: 28211442
Start: 1908382
End: 1909317
Strand: Direct
Name: 28211442
Synonym: CTC01798
Alternate gene names: NA
Gene position: 1908382-1909317 (Clockwise)
Preceding gene: 28211440
Following gene: 28211443
Centisome position: 68.17
GC content: 27.03
Gene sequence:
>936_bases ATGTACGTATCCTCAAAATTGAATCATTTATACAAAACTTCTAAAAAACTTTCTTTTGATGACAATTCAAAAATAGTCTT TATGAGTGATTGCCACAGAGGTGATGGCAGTTGGAAAGACAATTTAGCTCGTAATAGAAATATATATTTTTCTGCATTAC AATACTATTATAATAATGGGTTTACTTATATAGAATTAGGAGATGGAGATGAATTATGGGAAAATAGAAATTTTATAAAT ATATTGAATGCTCATGAAGAAATATTTAAACTCCTATATAAATTTCATATAGATAAAAGATTATATTTAATATTTGGCAA TCATGATATTATTAAAAAGGATAAAAAGTATATGCACAAAAATGAGCTCTGTATAAGTAGACATTCATATTATAAAAATT TATTACATGGTAAACTATTATTTGATAATATAGATGTTCATGAAGCACTAGTTTTAAAACATATACCTTCTAATAGCAAA ATATTGCTTATTCATGGTCATCAAGGAGATTTTATAAACGATAGATTTTGGAAATTTTCTAGATTTGCCGTAAGGTATAT TTGGAGTATACTAGAAGGCTCTTTCGGGTTTAAAGATCCTACGAGTCCTGCCAAGAATTATTCCAAAAAAAATTTTGTAG AAAAGCAAATAATAAAATGGGCAAAAGATAATAGATGTGTAATTATAGCTGGTCATACTCATAAACCTTACTTTCCTATG CCTAACGAAGTGCCATATTTTAACGATGGTAGTTGTGTTCATCCATATTCTGTTACCTCTATAGAAATAGAGTCCAGTAA GATTTGTCTTGTAAAATGGTCTATATCTGCTAATTCAAATGGCGCTTTATTTGTAGATCGTAAAATTATTAAAGGACCCG AAAAACTTATGGATTATTTTAATTTTAATAAAAGAAAAGCAACATTTTTAGATTAA
Upstream 100 bases:
>100_bases TTAATAAATAACTATTATTTATTCACTATTAATTATACAAACACATTTATTTTACTCCAACATATCTATATTAATATATC AATTTTAAAGGAATTTTAAT
Downstream 100 bases:
>100_bases TTTGCATTTCTTTATTCATTTCCATTTAAAAATATGCAATTTTCATTCATTTTATGTTATTATAGGTTTGTTGCAGAAAT TTATATATTATTTTATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MYVSSKLNHLYKTSKKLSFDDNSKIVFMSDCHRGDGSWKDNLARNRNIYFSALQYYYNNGFTYIELGDGDELWENRNFIN ILNAHEEIFKLLYKFHIDKRLYLIFGNHDIIKKDKKYMHKNELCISRHSYYKNLLHGKLLFDNIDVHEALVLKHIPSNSK ILLIHGHQGDFINDRFWKFSRFAVRYIWSILEGSFGFKDPTSPAKNYSKKNFVEKQIIKWAKDNRCVIIAGHTHKPYFPM PNEVPYFNDGSCVHPYSVTSIEIESSKICLVKWSISANSNGALFVDRKIIKGPEKLMDYFNFNKRKATFLD
Sequences:
>Translated_311_residues MYVSSKLNHLYKTSKKLSFDDNSKIVFMSDCHRGDGSWKDNLARNRNIYFSALQYYYNNGFTYIELGDGDELWENRNFIN ILNAHEEIFKLLYKFHIDKRLYLIFGNHDIIKKDKKYMHKNELCISRHSYYKNLLHGKLLFDNIDVHEALVLKHIPSNSK ILLIHGHQGDFINDRFWKFSRFAVRYIWSILEGSFGFKDPTSPAKNYSKKNFVEKQIIKWAKDNRCVIIAGHTHKPYFPM PNEVPYFNDGSCVHPYSVTSIEIESSKICLVKWSISANSNGALFVDRKIIKGPEKLMDYFNFNKRKATFLD >Mature_311_residues MYVSSKLNHLYKTSKKLSFDDNSKIVFMSDCHRGDGSWKDNLARNRNIYFSALQYYYNNGFTYIELGDGDELWENRNFIN ILNAHEEIFKLLYKFHIDKRLYLIFGNHDIIKKDKKYMHKNELCISRHSYYKNLLHGKLLFDNIDVHEALVLKHIPSNSK ILLIHGHQGDFINDRFWKFSRFAVRYIWSILEGSFGFKDPTSPAKNYSKKNFVEKQIIKWAKDNRCVIIAGHTHKPYFPM PNEVPYFNDGSCVHPYSVTSIEIESSKICLVKWSISANSNGALFVDRKIIKGPEKLMDYFNFNKRKATFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36698; Mature: 36698
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVSSKLNHLYKTSKKLSFDDNSKIVFMSDCHRGDGSWKDNLARNRNIYFSALQYYYNNG CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHEEEEHHHCCC FTYIELGDGDELWENRNFINILNAHEEIFKLLYKFHIDKRLYLIFGNHDIIKKDKKYMHK EEEEEECCCHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH NELCISRHSYYKNLLHGKLLFDNIDVHEALVLKHIPSNSKILLIHGHQGDFINDRFWKFS HHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH RFAVRYIWSILEGSFGFKDPTSPAKNYSKKNFVEKQIIKWAKDNRCVIIAGHTHKPYFPM HHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC PNEVPYFNDGSCVHPYSVTSIEIESSKICLVKWSISANSNGALFVDRKIIKGPEKLMDYF CCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEHHHHCCHHHHHHHH NFNKRKATFLD CCCCCEECCCC >Mature Secondary Structure MYVSSKLNHLYKTSKKLSFDDNSKIVFMSDCHRGDGSWKDNLARNRNIYFSALQYYYNNG CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHEEEEHHHCCC FTYIELGDGDELWENRNFINILNAHEEIFKLLYKFHIDKRLYLIFGNHDIIKKDKKYMHK EEEEEECCCHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH NELCISRHSYYKNLLHGKLLFDNIDVHEALVLKHIPSNSKILLIHGHQGDFINDRFWKFS HHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH RFAVRYIWSILEGSFGFKDPTSPAKNYSKKNFVEKQIIKWAKDNRCVIIAGHTHKPYFPM HHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC PNEVPYFNDGSCVHPYSVTSIEIESSKICLVKWSISANSNGALFVDRKIIKGPEKLMDYF CCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEHHHHCCHHHHHHHH NFNKRKATFLD CCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA