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The map label for this gene is yndE [H]

Identifier: 28211426

GI number: 28211426

Start: 1892127

End: 1893212

Strand: Direct

Name: yndE [H]

Synonym: CTC01778

Alternate gene names: 28211426

Gene position: 1892127-1893212 (Clockwise)

Preceding gene: 28211425

Following gene: 28211440

Centisome position: 67.59

GC content: 25.69

Gene sequence:

>1086_bases
GTGTTAACTAATAAAAATCAGATATCTTTAAGGCAGGCTTTACTTTTATTTTTAAATATACTCTTTAGTTCTTCAATAAG
ATTTATACCAAGTGTTACTTCAGCAAAAGCAAATCAAGCAGCATGGCTTACACCATTACCTTCCTTAGTTATTCTAATAT
TATTTATACTTATGCTAAATAATATTTACAAAAAACATTCTACGTCTTTTATAGATATAATGTATAACATTACAGGTAAA
ACTATAAGTAAAATACTGCTTGCTCTTTATATAACATGGTTTCAAATACCCATTGCATTATTTCTAAGATATTATGTTGA
AAGAATTTTAACAAGTATTTTTCCTAATGTAAGCACAGAACTATTCTTAATTTTATTACTTTTATTAGTTATTTATATAC
TTCCTTCAGGAATAGTTGTTATTGCTAGAATGAATGAAATAATATTTGTAATAATATTAATTTCTTTTTTATCTATTGTG
TTTCTATCTATTTCTAAAATTCAAATATCAAATTTAACTCCTATAAGTCCTATGGATATAATCCCTATATTAAAAGGAAG
TGTTCCAGTTACATCTATATGGTCCTATTTAATTTATATATTTTTTGTAGGAGATGAAATAAAAGATAAAGAAAAAATAA
AAAAATTAGGCTTAAAAATCGTAATATTTTTAGGAGTAATTACACCTGCACTCATAGCAACTTGTATTGGCACCTTAGGC
TATTCCGTTGTGGAACGTGCTCCCTTACCCTTTTTATCTGTATCAAAATTAATAACGGTTTTTGAAAGTCTTGGAAGAAT
ACACTCTATTTTAGTTGTTTTATGGGTAGCTTCAGATTTTATTCTTATATCAACACTTATATATATATCATTAAATATGC
TTAAATCCTTTTTTAATCTTAAAAGTATAAAGCCATTTATTAATATGTATGGTATTTTCATATGTTTCTTGGCTCTTTTA
CTATGCAATAGTAAATTTGAGCTTGAAGCATTCTCTAGTAAAATAGCATCTCCTGGTAACATTTTATTTGGTCTTGTAAT
TCCAGTTGCAATATTTGTAATTGGGAAACTTAGAAGAAGAATATAA

Upstream 100 bases:

>100_bases
CTCTTTCTTTAGGATATTTATATATATCCAATCCATATAGAAGAGGTTTTGCAGATATTATCCTCACTTTTTTTGGGATT
AAATACTAGGAGGTACAGCT

Downstream 100 bases:

>100_bases
AATTTTTAGGGAATACTTGTTAAAACAAAAATTCCCTAATTTGACTTACTCTTTTTCTACCTTTTCATAAAGCTTATTAC
CTGTCCATTCACAAGCATAT

Product: spore germination protein KB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLTNKNQISLRQALLLFLNILFSSSIRFIPSVTSAKANQAAWLTPLPSLVILILFILMLNNIYKKHSTSFIDIMYNITGK
TISKILLALYITWFQIPIALFLRYYVERILTSIFPNVSTELFLILLLLLVIYILPSGIVVIARMNEIIFVIILISFLSIV
FLSISKIQISNLTPISPMDIIPILKGSVPVTSIWSYLIYIFFVGDEIKDKEKIKKLGLKIVIFLGVITPALIATCIGTLG
YSVVERAPLPFLSVSKLITVFESLGRIHSILVVLWVASDFILISTLIYISLNMLKSFFNLKSIKPFINMYGIFICFLALL
LCNSKFELEAFSSKIASPGNILFGLVIPVAIFVIGKLRRRI

Sequences:

>Translated_361_residues
MLTNKNQISLRQALLLFLNILFSSSIRFIPSVTSAKANQAAWLTPLPSLVILILFILMLNNIYKKHSTSFIDIMYNITGK
TISKILLALYITWFQIPIALFLRYYVERILTSIFPNVSTELFLILLLLLVIYILPSGIVVIARMNEIIFVIILISFLSIV
FLSISKIQISNLTPISPMDIIPILKGSVPVTSIWSYLIYIFFVGDEIKDKEKIKKLGLKIVIFLGVITPALIATCIGTLG
YSVVERAPLPFLSVSKLITVFESLGRIHSILVVLWVASDFILISTLIYISLNMLKSFFNLKSIKPFINMYGIFICFLALL
LCNSKFELEAFSSKIASPGNILFGLVIPVAIFVIGKLRRRI
>Mature_361_residues
MLTNKNQISLRQALLLFLNILFSSSIRFIPSVTSAKANQAAWLTPLPSLVILILFILMLNNIYKKHSTSFIDIMYNITGK
TISKILLALYITWFQIPIALFLRYYVERILTSIFPNVSTELFLILLLLLVIYILPSGIVVIARMNEIIFVIILISFLSIV
FLSISKIQISNLTPISPMDIIPILKGSVPVTSIWSYLIYIFFVGDEIKDKEKIKKLGLKIVIFLGVITPALIATCIGTLG
YSVVERAPLPFLSVSKLITVFESLGRIHSILVVLWVASDFILISTLIYISLNMLKSFFNLKSIKPFINMYGIFICFLALL
LCNSKFELEAFSSKIASPGNILFGLVIPVAIFVIGKLRRRI

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40634; Mature: 40634

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNKNQISLRQALLLFLNILFSSSIRFIPSVTSAKANQAAWLTPLPSLVILILFILMLN
CCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
NIYKKHSTSFIDIMYNITGKTISKILLALYITWFQIPIALFLRYYVERILTSIFPNVSTE
HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLILLLLLVIYILPSGIVVIARMNEIIFVIILISFLSIVFLSISKIQISNLTPISPMDI
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
IPILKGSVPVTSIWSYLIYIFFVGDEIKDKEKIKKLGLKIVIFLGVITPALIATCIGTLG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVVERAPLPFLSVSKLITVFESLGRIHSILVVLWVASDFILISTLIYISLNMLKSFFNL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIKPFINMYGIFICFLALLLCNSKFELEAFSSKIASPGNILFGLVIPVAIFVIGKLRRR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MLTNKNQISLRQALLLFLNILFSSSIRFIPSVTSAKANQAAWLTPLPSLVILILFILMLN
CCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
NIYKKHSTSFIDIMYNITGKTISKILLALYITWFQIPIALFLRYYVERILTSIFPNVSTE
HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLILLLLLVIYILPSGIVVIARMNEIIFVIILISFLSIVFLSISKIQISNLTPISPMDI
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
IPILKGSVPVTSIWSYLIYIFFVGDEIKDKEKIKKLGLKIVIFLGVITPALIATCIGTLG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVVERAPLPFLSVSKLITVFESLGRIHSILVVLWVASDFILISTLIYISLNMLKSFFNL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIKPFINMYGIFICFLALLLCNSKFELEAFSSKIASPGNILFGLVIPVAIFVIGKLRRR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]