| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211307
Identifier: 28211307
GI number: 28211307
Start: 1766949
End: 1767278
Strand: Direct
Name: 28211307
Synonym: CTC01648
Alternate gene names: NA
Gene position: 1766949-1767278 (Clockwise)
Preceding gene: 28211305
Following gene: 28211308
Centisome position: 63.12
GC content: 28.79
Gene sequence:
>330_bases ATGACAAAAATAGTTATTGCATCTGCCTTTTCTCCCATGAGCCCTGATAGTATAGTTGCTACTATGAGGACCCAAATTAT CACATCATTAAATTGTTCTAAAAAAATTTTAACAGGAGATATTTTTTCTTTTTCCTTCAAGGTATTTAAGCCATATTTCT TAAGCCTACTATTGGCCTCTCTCGTACTTAATCCTATTTCTAATATTTCTTTTTCAATAGACAAATTAACACCCCCTAAA CTTTATTCACTGTTAAAATATATGCACAAACTTTCATTTAATGAACAAGGAATAATTATCACTTTAACTTTTTTGTTTTT TTTGCTATGA
Upstream 100 bases:
>100_bases CATTACTTTAGCTGTAGGTGCAGCCATATTCTTTAAAGATTCTAATGATTTTTCAGTTTTATACTCCTGTATAAAGCCTA AGCTTCCATTTATAACTATT
Downstream 100 bases:
>100_bases TTAATAAGCATATAAAAATTATAAAGACTTTAATTATTTCAAGGAGGATTTATTTTGAAAGACATAATTTATATTTCTGG ACACAGAAACCCAGATACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTKIVIASAFSPMSPDSIVATMRTQIITSLNCSKKILTGDIFSFSFKVFKPYFLSLLLASLVLNPISNISFSIDKLTPPK LYSLLKYMHKLSFNEQGIIITLTFLFFLL
Sequences:
>Translated_109_residues MTKIVIASAFSPMSPDSIVATMRTQIITSLNCSKKILTGDIFSFSFKVFKPYFLSLLLASLVLNPISNISFSIDKLTPPK LYSLLKYMHKLSFNEQGIIITLTFLFFLL >Mature_108_residues TKIVIASAFSPMSPDSIVATMRTQIITSLNCSKKILTGDIFSFSFKVFKPYFLSLLLASLVLNPISNISFSIDKLTPPKL YSLLKYMHKLSFNEQGIIITLTFLFFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12276; Mature: 12145
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIVIASAFSPMSPDSIVATMRTQIITSLNCSKKILTGDIFSFSFKVFKPYFLSLLLAS CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH LVLNPISNISFSIDKLTPPKLYSLLKYMHKLSFNEQGIIITLTFLFFLL HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC >Mature Secondary Structure TKIVIASAFSPMSPDSIVATMRTQIITSLNCSKKILTGDIFSFSFKVFKPYFLSLLLAS CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH LVLNPISNISFSIDKLTPPKLYSLLKYMHKLSFNEQGIIITLTFLFFLL HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA