| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211214
Identifier: 28211214
GI number: 28211214
Start: 1671194
End: 1672327
Strand: Direct
Name: 28211214
Synonym: CTC01544
Alternate gene names: NA
Gene position: 1671194-1672327 (Clockwise)
Preceding gene: 28211204
Following gene: 28211216
Centisome position: 59.7
GC content: 33.33
Gene sequence:
>1134_bases ATGACATCCTGCTTCATGTTTTCCATTTCTTCTCTAATCATACCTTTAAGCTTTTCAATAGGTAATACCGCTTCCATAGC ACTGCCTCGACCATTGTTCCTATCTCCAACACCTATACCATTAGGGAATACTGTTGGCTTAGTGAATATACCTCCCTCAT GCATCCATTTAACGCCAAGCTTAGGCACTGTCATTTCCTTTAAACTAAACTTACCTTCTAAAGTAAATACTGGTAGCTTA GGTCTTGGTATTTTAATCTCTGGTAATTTAAGATTCTTGAAGAAACCAAATATCTTATCTAAAGCGGTCTTAACTGCGTC TTTTGCTACTGTCATTGGCTTAGTTATCTTTTCTTTAATGTTATTCCATATAGTTCCTACTTTAGTTGCTAGAGAAGTAA ATATATTACCTGTAGTTTCTTTTATTCCATTCCATACGCCTAATACCTTCTCTTTAACTCCATTAACCACATTACTGATA ACGGTCTTAATTCCATTCCATATATTAGTTACAACGCCTTTAATAGCGTTAAATACGGTACTAGTCACATTCTTAATAAC ATTCCATGTAGTTGTTATAATAGCTTTAACTCCATTGACTACGCCTGTAATAACCCCTTTTATGGCGTTCCATACGGTTG TTACTACTCCCTTTATAGCATTAAATACAGTAGTGGTTACAAGCTTAATACTCTCCCATACTGTAGTAATAACATTCTTA ATTCCTGTAACTATAGTAGTTATAAATCCACTAATAAAGTTCCATACAGTTACTATAATATTCTTAATCTTGTTCCAAGA AGAATCTTGGCGATCAACTTGTTCACTTATGATATTAGTTATCCAACCAAATATACTAGAGAATATACCTTTAATCCAAT TAAAAGCTCCACTTATACCGCTACTAATACCATTCCATATGGCGGAAATAATTCCTTTGATGATATTAAGTGGTACTTGT ATTATAGCTATTAATATGGTCATGGCTGATTCTATTAAAAATCTCATACCTAATAGGAATCCTTTAAAGATATTCATGAT AAATTCACCTATTGGAGCTAAGAAGTTAGCTATACTTTCCATTAAGTTGCTGAACCATTCAGAAATCGCAGTACCTATAT TAGTACACCATTGA
Upstream 100 bases:
>100_bases TACAAAATTATGCATATACTACCTCCTTCTTCTATATTCCATTTCTGTACCTAAGAATGGAACTGTAGCTTGGGCTATTA CTCTACCATCTACATTAATA
Downstream 100 bases:
>100_bases ATAAAGCTATTATACCCATTAGTAAATAAGTTACTTATATATTCCCATTCATTAGCAAACCATGCGGAAATCCTATCCCA ATTCTTATAGATTAGAAATG
Product: phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTSCFMFSISSLIIPLSFSIGNTASIALPRPLFLSPTPIPLGNTVGLVNIPPSCIHLTPSLGTVISFKLNLPSKVNTGSL GLGILISGNLRFLKKPNILSKAVLTASFATVIGLVIFSLMLFHIVPTLVAREVNILPVVSFIPFHTPNTFSLTPLTTLLI TVLIPFHILVTTPLIALNTVLVTFLITFHVVVIIALTPLTTPVITPFMAFHTVVTTPFIALNTVVVTSLILSHTVVITFL IPVTIVVINPLIKFHTVTIIFLILFQEESWRSTCSLMILVIQPNILENIPLIQLKAPLIPLLIPFHMAEIIPLMILSGTC IIAINMVMADSIKNLIPNRNPLKIFMINSPIGAKKLAILSIKLLNHSEIAVPILVHH
Sequences:
>Translated_377_residues MTSCFMFSISSLIIPLSFSIGNTASIALPRPLFLSPTPIPLGNTVGLVNIPPSCIHLTPSLGTVISFKLNLPSKVNTGSL GLGILISGNLRFLKKPNILSKAVLTASFATVIGLVIFSLMLFHIVPTLVAREVNILPVVSFIPFHTPNTFSLTPLTTLLI TVLIPFHILVTTPLIALNTVLVTFLITFHVVVIIALTPLTTPVITPFMAFHTVVTTPFIALNTVVVTSLILSHTVVITFL IPVTIVVINPLIKFHTVTIIFLILFQEESWRSTCSLMILVIQPNILENIPLIQLKAPLIPLLIPFHMAEIIPLMILSGTC IIAINMVMADSIKNLIPNRNPLKIFMINSPIGAKKLAILSIKLLNHSEIAVPILVHH >Mature_376_residues TSCFMFSISSLIIPLSFSIGNTASIALPRPLFLSPTPIPLGNTVGLVNIPPSCIHLTPSLGTVISFKLNLPSKVNTGSLG LGILISGNLRFLKKPNILSKAVLTASFATVIGLVIFSLMLFHIVPTLVAREVNILPVVSFIPFHTPNTFSLTPLTTLLIT VLIPFHILVTTPLIALNTVLVTFLITFHVVVIIALTPLTTPVITPFMAFHTVVTTPFIALNTVVVTSLILSHTVVITFLI PVTIVVINPLIKFHTVTIIFLILFQEESWRSTCSLMILVIQPNILENIPLIQLKAPLIPLLIPFHMAEIIPLMILSGTCI IAINMVMADSIKNLIPNRNPLKIFMINSPIGAKKLAILSIKLLNHSEIAVPILVHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40983; Mature: 40852
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCFMFSISSLIIPLSFSIGNTASIALPRPLFLSPTPIPLGNTVGLVNIPPSCIHLTPS CCCCHHEEHHHHHEEEEECCCCEEEEECCCCEECCCCCCCCCCCEEEEECCCHHEEECCC LGTVISFKLNLPSKVNTGSLGLGILISGNLRFLKKPNILSKAVLTASFATVIGLVIFSLM CCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LFHIVPTLVAREVNILPVVSFIPFHTPNTFSLTPLTTLLITVLIPFHILVTTPLIALNTV HHHHHHHHHHCCCCEEEEEHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTFLITFHVVVIIALTPLTTPVITPFMAFHTVVTTPFIALNTVVVTSLILSHTVVITFL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IPVTIVVINPLIKFHTVTIIFLILFQEESWRSTCSLMILVIQPNILENIPLIQLKAPLIP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEEEECCHHHHCCCEEEECCCHHH LLIPFHMAEIIPLMILSGTCIIAINMVMADSIKNLIPNRNPLKIFMINSPIGAKKLAILS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE IKLLNHSEIAVPILVHH EEEECCCCEEEEEEEEC >Mature Secondary Structure TSCFMFSISSLIIPLSFSIGNTASIALPRPLFLSPTPIPLGNTVGLVNIPPSCIHLTPS CCCHHEEHHHHHEEEEECCCCEEEEECCCCEECCCCCCCCCCCEEEEECCCHHEEECCC LGTVISFKLNLPSKVNTGSLGLGILISGNLRFLKKPNILSKAVLTASFATVIGLVIFSLM CCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LFHIVPTLVAREVNILPVVSFIPFHTPNTFSLTPLTTLLITVLIPFHILVTTPLIALNTV HHHHHHHHHHCCCCEEEEEHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTFLITFHVVVIIALTPLTTPVITPFMAFHTVVTTPFIALNTVVVTSLILSHTVVITFL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IPVTIVVINPLIKFHTVTIIFLILFQEESWRSTCSLMILVIQPNILENIPLIQLKAPLIP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEEEECCHHHHCCCEEEECCCHHH LLIPFHMAEIIPLMILSGTCIIAINMVMADSIKNLIPNRNPLKIFMINSPIGAKKLAILS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE IKLLNHSEIAVPILVHH EEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA