| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211091
Identifier: 28211091
GI number: 28211091
Start: 1525542
End: 1526228
Strand: Direct
Name: 28211091
Synonym: CTC01414
Alternate gene names: NA
Gene position: 1525542-1526228 (Clockwise)
Preceding gene: 28211090
Following gene: 28211092
Centisome position: 54.5
GC content: 27.22
Gene sequence:
>687_bases TTGAATAAAAAAATTAGAGAGGAAATTTTTGAATTAATAGATGAAGATTATAAGAAGTTTTCTTCTTCTCTTTTACCTAA TATAGATAACATTTTAGGAGTTAGATTACCTGAACTTCGTAAGCTTGCAAAGAAAGTAGCAAAGGATGATTGGCGGAAAT TCATAGACACTGCTGATAACCAGTATTTTGAACAAATTATGCTTCAAGGAATGGTTTTAGGTTATATAAAAACAAACATT GAAGAAATTCTTCTATATGTTGCTGAATTTATACCGAAAATTGATAACTGGTCTGTGTGTGATAGCTTTTGTGGTGGTTT GAAATTTACTAATAATAATATGGAACAGGTTTGGAACTTTATACAACCATTTTTATCTTCTAAAAAAGAATATGAGGTTC GTTTTGCCGTTGTAATGCTACTTGATTTCTATATTAACGATGAATATATAGATAAAGTACTTAAATTATTAGATAATGTA AATCATCCTGGCTACTATGCAAAAATGGCAGTTGCTTGGGCAGTTTCTATTTGTTATATAAAATTTCCGGAAAAAACAAT GGATTATTTAAAAAATAATAATTTAGATTATTTTACATATAATAAATCACTTCAAAAAATTTGTGAGTCTTTACGGGTGG ATAAAGAAACAAAAAAAATTATTAAAGCTATGAGGCGAAAATTATAA
Upstream 100 bases:
>100_bases CAAATGGAAAATTAGTAGGATATGGTGGTGGACTAAAAATTAAAGAATACTTATTAAAAATTGAAAAAAATATAAATAGT TAATAAAAAGGAGATAAACA
Downstream 100 bases:
>100_bases ATTATTTTATAAAACATTAATAGTGCAACAACTTGTTGCACTATTAAAAGTAATCTTATTTAAAACTTATATATATCTAT TTTTTTGATATATAGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNKKIREEIFELIDEDYKKFSSSLLPNIDNILGVRLPELRKLAKKVAKDDWRKFIDTADNQYFEQIMLQGMVLGYIKTNI EEILLYVAEFIPKIDNWSVCDSFCGGLKFTNNNMEQVWNFIQPFLSSKKEYEVRFAVVMLLDFYINDEYIDKVLKLLDNV NHPGYYAKMAVAWAVSICYIKFPEKTMDYLKNNNLDYFTYNKSLQKICESLRVDKETKKIIKAMRRKL
Sequences:
>Translated_228_residues MNKKIREEIFELIDEDYKKFSSSLLPNIDNILGVRLPELRKLAKKVAKDDWRKFIDTADNQYFEQIMLQGMVLGYIKTNI EEILLYVAEFIPKIDNWSVCDSFCGGLKFTNNNMEQVWNFIQPFLSSKKEYEVRFAVVMLLDFYINDEYIDKVLKLLDNV NHPGYYAKMAVAWAVSICYIKFPEKTMDYLKNNNLDYFTYNKSLQKICESLRVDKETKKIIKAMRRKL >Mature_228_residues MNKKIREEIFELIDEDYKKFSSSLLPNIDNILGVRLPELRKLAKKVAKDDWRKFIDTADNQYFEQIMLQGMVLGYIKTNI EEILLYVAEFIPKIDNWSVCDSFCGGLKFTNNNMEQVWNFIQPFLSSKKEYEVRFAVVMLLDFYINDEYIDKVLKLLDNV NHPGYYAKMAVAWAVSICYIKFPEKTMDYLKNNNLDYFTYNKSLQKICESLRVDKETKKIIKAMRRKL
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27090; Mature: 27090
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIREEIFELIDEDYKKFSSSLLPNIDNILGVRLPELRKLAKKVAKDDWRKFIDTADN CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QYFEQIMLQGMVLGYIKTNIEEILLYVAEFIPKIDNWSVCDSFCGGLKFTNNNMEQVWNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCHHHHHHH IQPFLSSKKEYEVRFAVVMLLDFYINDEYIDKVLKLLDNVNHPGYYAKMAVAWAVSICYI HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KFPEKTMDYLKNNNLDYFTYNKSLQKICESLRVDKETKKIIKAMRRKL CCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNKKIREEIFELIDEDYKKFSSSLLPNIDNILGVRLPELRKLAKKVAKDDWRKFIDTADN CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QYFEQIMLQGMVLGYIKTNIEEILLYVAEFIPKIDNWSVCDSFCGGLKFTNNNMEQVWNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCHHHHHHH IQPFLSSKKEYEVRFAVVMLLDFYINDEYIDKVLKLLDNVNHPGYYAKMAVAWAVSICYI HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KFPEKTMDYLKNNNLDYFTYNKSLQKICESLRVDKETKKIIKAMRRKL CCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA