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The map label for this gene is arnF [H]

Identifier: 28210978

GI number: 28210978

Start: 1388975

End: 1389331

Strand: Direct

Name: arnF [H]

Synonym: CTC01293

Alternate gene names: 28210978

Gene position: 1388975-1389331 (Clockwise)

Preceding gene: 28210977

Following gene: 28210979

Centisome position: 49.62

GC content: 29.41

Gene sequence:

>357_bases
ATGATGGGACTTATATTGAGCTCAGTATTTTTAGGTGCTTTAGGGCAGATATTAGTAAAAGTAGGAGCTACAAGCTTAAA
TTTGAGTTTTGCACCAGGACAATTTATACCAAGTATTATTAGTATATTGAAAAACTTTTTTGTTATGAGTGGGATAGTAT
CCTATGGAACTAGCTTTTTGATATGGATAAAGGTGTTAAGTAAGGTGGAACTTAGTTATGCATATCCAATGGTTAGTTTA
GGTTATGTTATAACTACAATATATGCTTATTTTTTCCTGAATGAAAATATCTCAATTGAAAGAGTATTAGGAATATTACT
AATTATAGGTGGAGTATTTTTGATTTCACGAAATTAA

Upstream 100 bases:

>100_bases
TCATTTCCATTAATATTTTTTATGATATATTTATTTGCTACCTGTATAGAACATTTGTTTAGGTTAAGAAATAAATCCTT
ATAAGAGGAGGAAAATACAT

Downstream 100 bases:

>100_bases
AAATAAAAATAATTGCAATTTAAGAACATCTCTTATGAAGATATATCTATTTTTACGGCGTTACACTTTATAATGAAATA
AAATGTGAAAAAATCAAAAA

Product: transporter

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MMGLILSSVFLGALGQILVKVGATSLNLSFAPGQFIPSIISILKNFFVMSGIVSYGTSFLIWIKVLSKVELSYAYPMVSL
GYVITTIYAYFFLNENISIERVLGILLIIGGVFLISRN

Sequences:

>Translated_118_residues
MMGLILSSVFLGALGQILVKVGATSLNLSFAPGQFIPSIISILKNFFVMSGIVSYGTSFLIWIKVLSKVELSYAYPMVSL
GYVITTIYAYFFLNENISIERVLGILLIIGGVFLISRN
>Mature_118_residues
MMGLILSSVFLGALGQILVKVGATSLNLSFAPGQFIPSIISILKNFFVMSGIVSYGTSFLIWIKVLSKVELSYAYPMVSL
GYVITTIYAYFFLNENISIERVLGILLIIGGVFLISRN

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022832 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 12908; Mature: 12908

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGLILSSVFLGALGQILVKVGATSLNLSFAPGQFIPSIISILKNFFVMSGIVSYGTSFL
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWIKVLSKVELSYAYPMVSLGYVITTIYAYFFLNENISIERVLGILLIIGGVFLISRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMGLILSSVFLGALGQILVKVGATSLNLSFAPGQFIPSIISILKNFFVMSGIVSYGTSFL
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWIKVLSKVELSYAYPMVSLGYVITTIYAYFFLNENISIERVLGILLIIGGVFLISRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA