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The map label for this gene is recA

Identifier: 28210974

GI number: 28210974

Start: 1383544

End: 1384596

Strand: Direct

Name: recA

Synonym: CTC01289

Alternate gene names: 28210974

Gene position: 1383544-1384596 (Clockwise)

Preceding gene: 28210973

Following gene: 28210975

Centisome position: 49.43

GC content: 33.05

Gene sequence:

>1053_bases
ATGGATAAAGAAAAATTAAAAGCCATAGAAGCAGCTATGGGAAACATAGAAAAGCAATTTGGTAAAGGCTCTGTAATGAA
ATTAGGAGAAAAAAACATATTGGATATAGAAGCTATTTCCACAGGATGTCTTGGAATGGACATAGCTTTAGGTATAGGTG
GAGTTCCAAAAGGAAGAATAGTAGAAATATATGGACCTGAATCATCAGGTAAGACAACTGTGGCATTACACATAATAGCA
GAAGCTCAAAAGAATGGTGGAGTTGCAGCTTTTATAGATGCTGAGCATGCATTAGATCCATCTTATGCAAGAAAATTAGG
AGTAGATATAGACAATTTAATAGTTTCTCAACCAGATACAGGAGAACAAGGATTGGAAATAGCAGAAGCTCTTGTTAGAT
CCAATGCTATAGATATAGTAGTTGTTGACTCTGTAGCGGCATTAGTTCCTAAGGCAGAAATTCAGGGAGAGATGGGAGAT
TCTCATGTTGGATTACAAGCAAGATTGATGTCTCAAGCCCTTAGAAAATTAGCAGGTTCCATAAACAAATCTAACTGTGT
AGCTATTTTCATCAATCAATTAAGAGAAAAAGTTGGAATAATGTTTGGAAGTCCTGAAACTACACCGGGAGGAAGGGCAC
TTAAATTTTATTCTAGTGTAAGATTGGATGTTAGAAGAATAGATACAATAAAACAAGGAGATGAGTTTTTAGGAAATAGA
ACTAGAGTAAAAGTAACTAAAAATAAAGTAGCTCCTCCTTTTAAAAATGCTGAGTTTGATATAATGTATAATGAAGGTAT
ATCAAGAACAGGTGATGTTTTAGACTTGGGTGTTAAAGAAGAAATAGTGCAAAAAAGTGGATCTTGGTTTTCCTATAATG
ATGTAAGATTAGGTCAGGGTAGAGAAAATGCAAAACAGTTTTTAAAGGATAATCCAGAACTACTTTATGAAATAGAAAAT
ACTATAAGAGAAAAATATGATCTTCCAATTGTTAAAAATAATATTAAAGCAGAAGTGGAAGATAAAAAAGAGAAAAAAGC
AGAAGAAGTTTAA

Upstream 100 bases:

>100_bases
TATTCATTAATATTGGGTTGACCAAAGTGTTAAATTAAGTTATAATTAGAACAGATGTTCGAAATAAAGAAAGGATGGTG
ACCCTTAAATAGGGATTATT

Downstream 100 bases:

>100_bases
ATTATATACAAATATATATAACTTGACATAATAAAAAAATTAATATAAAATAAAGACAAAATCTGGTTTAGCAAAAAAGT
TAGTCCATTTGAATAAATTA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDKEKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRIVEIYGPESSGKTTVALHIIA
EAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDTGEQGLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGD
SHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIKQGDEFLGNR
TRVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQGRENAKQFLKDNPELLYEIEN
TIREKYDLPIVKNNIKAEVEDKKEKKAEEV

Sequences:

>Translated_350_residues
MDKEKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRIVEIYGPESSGKTTVALHIIA
EAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDTGEQGLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGD
SHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIKQGDEFLGNR
TRVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQGRENAKQFLKDNPELLYEIEN
TIREKYDLPIVKNNIKAEVEDKKEKKAEEV
>Mature_350_residues
MDKEKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRIVEIYGPESSGKTTVALHIIA
EAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDTGEQGLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGD
SHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIKQGDEFLGNR
TRVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQGRENAKQFLKDNPELLYEIEN
TIREKYDLPIVKNNIKAEVEDKKEKKAEEV

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=324, Percent_Identity=65.4320987654321, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CLOTE (Q895I5)

Other databases:

- EMBL:   AE015927
- RefSeq:   NP_781918.1
- ProteinModelPortal:   Q895I5
- SMR:   Q895I5
- GeneID:   1059119
- GenomeReviews:   AE015927_GR
- KEGG:   ctc:CTC01289
- NMPDR:   fig|212717.1.peg.1140
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q895I5
- ProtClustDB:   PRK09354
- BioCyc:   CTET212717:CTC_01289-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38215; Mature: 38215

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRI
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHCCCCCCEEHEECCCCCCCCCE
VEIYGPESSGKTTVALHIIAEAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDT
EEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECHHCCCHHHHHHHCCCHHHHEECCCCC
GEQGLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGDSHVGLQARLMSQALRKLAGS
CHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
INKSNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIKQGDEFLGNR
CCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHCCC
TRVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQG
EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEECCEECCCC
RENAKQFLKDNPELLYEIENTIREKYDLPIVKNNIKAEVEDKKEKKAEEV
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDKEKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRI
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHCCCCCCEEHEECCCCCCCCCE
VEIYGPESSGKTTVALHIIAEAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDT
EEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECHHCCCHHHHHHHCCCHHHHEECCCCC
GEQGLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGDSHVGLQARLMSQALRKLAGS
CHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
INKSNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIKQGDEFLGNR
CCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHCCC
TRVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQG
EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEECCEECCCC
RENAKQFLKDNPELLYEIENTIREKYDLPIVKNNIKAEVEDKKEKKAEEV
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12552129