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The map label for this gene is thiN [H]

Identifier: 28210916

GI number: 28210916

Start: 1315688

End: 1316329

Strand: Direct

Name: thiN [H]

Synonym: CTC01228

Alternate gene names: 28210916

Gene position: 1315688-1316329 (Clockwise)

Preceding gene: 28210915

Following gene: 28210917

Centisome position: 47.0

GC content: 25.23

Gene sequence:

>642_bases
ATGAAAGCTTTAATAGTCTGTGGAGGAAAAGCACCAGAAAAAGAATTATTATTAGAGGAATTAAAAGATAGCGATATAAT
TATAGCAGCAGATAAAGGAGCAGAAGCTTTATATAAATGTAATATAAAACCTAATTTCATAGTAGGAGATTTTGATTCTA
TAGATGAAAATATTTTAAATTATTATAGAAAAAATAACATTAATTTAAATGCATTTCCAGTAGAAAAGGATTTTACTGAT
TCTGAGGCTGCAGTTATAAAGGCCATAAATATGGGAACTCATAAAATAGCTTTATTAGGATGTACTGGTAGCAGATTAGA
TCATGTTTTATCTAATATAAATCTTTTATATTATTCTTTAACTTCTAATATCCAATGTTATATAAGAGATGAGTTTAATT
ATATAAGAATGGTAGAGAAACCTACCTATATAAAAAAAGATAAATTTAAATATTTTTCATTGCTAAGTTTTAAAGAAGAT
GTAATAAATTTAACTATACATGGGGCTAAATATCCTTTAAATAACCATCATTTGAAGGTAGGATATCTTTCTGGATTAGG
AGTATCAAATGAAATTAAAGAAAATGAAGCTTATATAGAATTTTCTTCTGGAATTCTTTTGATAATTCAGAGCAGAGATT
AA

Upstream 100 bases:

>100_bases
ATATAGCAAACTGTGGAGTAGATTTAGTTGTAGCAGGATCAGCAGTTTTTAAAGATGGTAAAATAGAGGAGAACTTAAAG
GTTTTAAGAGAGGCTTTAAG

Downstream 100 bases:

>100_bases
CAAACACCCTTTTTAAAATTGCACATATAATATAATAAAATCAATTTAAAGAGGGGCTTGATTTGTGGAAGAGTAGGCGT
GGCAGAAAAAAATTAGGTAT

Product: thiamin pyrophosphokinase

Products: NA

Alternate protein names: TPK; Thiamine diphosphokinase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKALIVCGGKAPEKELLLEELKDSDIIIAADKGAEALYKCNIKPNFIVGDFDSIDENILNYYRKNNINLNAFPVEKDFTD
SEAAVIKAINMGTHKIALLGCTGSRLDHVLSNINLLYYSLTSNIQCYIRDEFNYIRMVEKPTYIKKDKFKYFSLLSFKED
VINLTIHGAKYPLNNHHLKVGYLSGLGVSNEIKENEAYIEFSSGILLIIQSRD

Sequences:

>Translated_213_residues
MKALIVCGGKAPEKELLLEELKDSDIIIAADKGAEALYKCNIKPNFIVGDFDSIDENILNYYRKNNINLNAFPVEKDFTD
SEAAVIKAINMGTHKIALLGCTGSRLDHVLSNINLLYYSLTSNIQCYIRDEFNYIRMVEKPTYIKKDKFKYFSLLSFKED
VINLTIHGAKYPLNNHHLKVGYLSGLGVSNEIKENEAYIEFSSGILLIIQSRD
>Mature_213_residues
MKALIVCGGKAPEKELLLEELKDSDIIIAADKGAEALYKCNIKPNFIVGDFDSIDENILNYYRKNNINLNAFPVEKDFTD
SEAAVIKAINMGTHKIALLGCTGSRLDHVLSNINLLYYSLTSNIQCYIRDEFNYIRMVEKPTYIKKDKFKYFSLLSFKED
VINLTIHGAKYPLNNHHLKVGYLSGLGVSNEIKENEAYIEFSSGILLIIQSRD

Specific function: Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate [H]

COG id: COG1564

COG function: function code H; Thiamine pyrophosphokinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiamine pyrophosphokinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006282
- InterPro:   IPR007373
- InterPro:   IPR007371 [H]

Pfam domain/function: PF04263 TPK_catalytic [H]

EC number: =2.7.6.2 [H]

Molecular weight: Translated: 24124; Mature: 24124

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIVCGGKAPEKELLLEELKDSDIIIAADKGAEALYKCNIKPNFIVGDFDSIDENILN
CCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEECHHHHHHHHHH
YYRKNNINLNAFPVEKDFTDSEAAVIKAINMGTHKIALLGCTGSRLDHVLSNINLLYYSL
HHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHCCEEEEEEE
TSNIQCYIRDEFNYIRMVEKPTYIKKDKFKYFSLLSFKEDVINLTIHGAKYPLNNHHLKV
CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEHHHCCCCEEEEEEECEECCCCCCEEEE
GYLSGLGVSNEIKENEAYIEFSSGILLIIQSRD
EEEECCCCCCCCCCCCEEEEECCCEEEEEEECC
>Mature Secondary Structure
MKALIVCGGKAPEKELLLEELKDSDIIIAADKGAEALYKCNIKPNFIVGDFDSIDENILN
CCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEECHHHHHHHHHH
YYRKNNINLNAFPVEKDFTDSEAAVIKAINMGTHKIALLGCTGSRLDHVLSNINLLYYSL
HHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHCCEEEEEEE
TSNIQCYIRDEFNYIRMVEKPTYIKKDKFKYFSLLSFKEDVINLTIHGAKYPLNNHHLKV
CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEHHHCCCCEEEEEEECEECCCCCCEEEE
GYLSGLGVSNEIKENEAYIEFSSGILLIIQSRD
EEEECCCCCCCCCCCCEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]