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The map label for this gene is yeiE [C]

Identifier: 28210900

GI number: 28210900

Start: 1298852

End: 1299763

Strand: Direct

Name: yeiE [C]

Synonym: CTC01212

Alternate gene names: 28210900

Gene position: 1298852-1299763 (Clockwise)

Preceding gene: 28210899

Following gene: 28210901

Centisome position: 46.4

GC content: 25.33

Gene sequence:

>912_bases
ATGGTAAAAACTATAAGGAGTAAGACTAGAATGATTGATTTTAAATTAATAACTTTTTTAACTGTAGTTAAAGTAGGAAG
TTTTACAAGAGCTGCTAATGTATTAAATTTAACCCAACCAGCTATATCACAACATATAAAGTATATAGAAAATTACTATG
GAGTAGAACTTTTTAAAAATAAAAACAAAAATATGGAATTAACAGAAGAGGGAAAAGTTTTATATAAATATGGAAGACAA
GTGGAGAATATTAGCAATATAGTTCATATGAAATTAAAAAACTCTATAAATAAAAGATATGTAGTTGGAGCAACTTTGAC
CATAGGAGGATATGTAATTCCTTCAATAATAGGAAAATATAAGAAAGAACACAATGATATAGATGTTATATTAAAAGTTG
AAAACACTGATACTGTAATAAAAATGCTCTATAAAGGAGAAATAGAACTTGGAGTTATAGAAGGAGGATTTAGTAAAGAA
AAAATAGAGTATACTAAGTTTAAGGAGGATGAATTAGTATTAGTAGTGTCTCCAAATCATAAATTTGCTGATAAAAATTT
TGTTAATATAGAAGAGATTTTACAAGATAAATTAATCTTAAGAGAAGATGGATCTGGTACAAGGCAAATTTTCGAAGAAC
ATTTAATTGAAATGGGAATAAGAAAAGATGATTATAACATCTATATGGAAATAGGAAATATTTCAGCCATAGTATCTTTA
GTAAAATCAAATTTGGGATGTACCATAATTTCTAGAGAAGCTGTGAAAGAAAATATCGAAGAGGGTTCTTTAAAAGAAGT
TCAAATAGAAAACTTTAATATGAGAAGGGAATTTAACTTTATATATTTAAAAGATGGAAACGAAAGATTTATAAAAAGTT
TTACAATGTTTTGTAAGGAAAATGATATATAA

Upstream 100 bases:

>100_bases
AAATATAATATTTATGTATTGAATAAAGAAAAGGTAAAGTATATTATAAAATGTGTAGTATTAAAATAGTAAAGTTTAAA
AACTTTACTATTTTAATTTT

Downstream 100 bases:

>100_bases
ATATTTCTTATCCTGGTATTACAAATAGTAATTGGACAATATATACGTCATCTATTAATATTAACATTGATAACAAAATA
ACAATATTAATATTATTTTT

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIENYYGVELFKNKNKNMELTEEGKVLYKYGRQ
VENISNIVHMKLKNSINKRYVVGATLTIGGYVIPSIIGKYKKEHNDIDVILKVENTDTVIKMLYKGEIELGVIEGGFSKE
KIEYTKFKEDELVLVVSPNHKFADKNFVNIEEILQDKLILREDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSL
VKSNLGCTIISREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKENDI

Sequences:

>Translated_303_residues
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIENYYGVELFKNKNKNMELTEEGKVLYKYGRQ
VENISNIVHMKLKNSINKRYVVGATLTIGGYVIPSIIGKYKKEHNDIDVILKVENTDTVIKMLYKGEIELGVIEGGFSKE
KIEYTKFKEDELVLVVSPNHKFADKNFVNIEEILQDKLILREDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSL
VKSNLGCTIISREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKENDI
>Mature_303_residues
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIENYYGVELFKNKNKNMELTEEGKVLYKYGRQ
VENISNIVHMKLKNSINKRYVVGATLTIGGYVIPSIIGKYKKEHNDIDVILKVENTDTVIKMLYKGEIELGVIEGGFSKE
KIEYTKFKEDELVLVVSPNHKFADKNFVNIEEILQDKLILREDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSL
VKSNLGCTIISREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKENDI

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=291, Percent_Identity=28.5223367697594, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI157672245, Length=244, Percent_Identity=24.1803278688525, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1788748, Length=252, Percent_Identity=23.8095238095238, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI145693105, Length=284, Percent_Identity=26.056338028169, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87082132, Length=257, Percent_Identity=28.0155642023346, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081904, Length=201, Percent_Identity=28.3582089552239, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787879, Length=258, Percent_Identity=21.7054263565891, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790399, Length=261, Percent_Identity=21.455938697318, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788297, Length=250, Percent_Identity=24.8, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35053; Mature: 35053

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIENYYGVELFKN
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEC
KNKNMELTEEGKVLYKYGRQVENISNIVHMKLKNSINKRYVVGATLTIGGYVIPSIIGKY
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHH
KKEHNDIDVILKVENTDTVIKMLYKGEIELGVIEGGFSKEKIEYTKFKEDELVLVVSPNH
HHCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCEEEEECCCC
KFADKNFVNIEEILQDKLILREDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSL
CCCCCCCCCHHHHHHHCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH
VKSNLGCTIISREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKE
HHCCCCEEEEEHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHCC
NDI
CCC
>Mature Secondary Structure
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIENYYGVELFKN
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEC
KNKNMELTEEGKVLYKYGRQVENISNIVHMKLKNSINKRYVVGATLTIGGYVIPSIIGKY
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHH
KKEHNDIDVILKVENTDTVIKMLYKGEIELGVIEGGFSKEKIEYTKFKEDELVLVVSPNH
HHCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCEEEEECCCC
KFADKNFVNIEEILQDKLILREDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSL
CCCCCCCCCHHHHHHHCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH
VKSNLGCTIISREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKE
HHCCCCEEEEEHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHCC
NDI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]