The gene/protein map for NC_004557 is currently unavailable.
Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210896

Identifier: 28210896

GI number: 28210896

Start: 1295211

End: 1295669

Strand: Direct

Name: 28210896

Synonym: CTC01208

Alternate gene names: NA

Gene position: 1295211-1295669 (Clockwise)

Preceding gene: 28210894

Following gene: 28210897

Centisome position: 46.27

GC content: 27.45

Gene sequence:

>459_bases
ATGAAATTAGCAGAAGCATTAATATTAAGATCGGATTATCAAAGAAAGATAGAACAGATAAAAAATAGACTTATAAATAA
TGCAAAAGTTCAAGAGGGAGAAGAACCATCTGAAGAACCAGAAATTTTATTAAAAGAATTAGACGAAGTTATTGAAAATT
TGACTGATTTAATTAAAAGAATAAATAAAACAAATTCAAAAACTAAATTCAATGAGGAAATGACCTTAGCTGATGCATTA
GCAGAGAGAGAAAAACTTTGGGACAAAAGACTTATATTAAGTAATCTAGCTGAAGTAGCTGCTGTAAAACATGATAGATT
TAGTAGATCAGAGGTTAAATATTTTAGCACAATAGATATAAAAGAAACTCAAAAAGAAGTGGACAGACTATCAAAGGAGT
TTAGAATTTTAGATACAAAAATACAAGGATTAAACTGGACTGTAGATTTAATTAGTTAG

Upstream 100 bases:

>100_bases
TTGCATTATGAAATGTCCTTGTATTGACTTGAAAATGGATATAATGTAATATTACTAATAAATATATGAATACTTTAGTG
AATTCAAAGGATGTGTTTAT

Downstream 100 bases:

>100_bases
TAGATAACAGTAAATAACTAATAATTAAGGTAGGTAACTTAAATTTGTAAAGGTGAGTACAAAAATTAAAACTTATGATT
ACTTATAGTGGTGGTATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADAL
AEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDLIS

Sequences:

>Translated_152_residues
MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADAL
AEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDLIS
>Mature_152_residues
MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADAL
AEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDLIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17816; Mature: 17816

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
INKTNSKTKFNEEMTLADALAEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
KETQKEVDRLSKEFRILDTKIQGLNWTVDLIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
INKTNSKTKFNEEMTLADALAEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
KETQKEVDRLSKEFRILDTKIQGLNWTVDLIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA