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The map label for this gene is yihM [H]

Identifier: 28210866

GI number: 28210866

Start: 1253834

End: 1254787

Strand: Direct

Name: yihM [H]

Synonym: CTC01174

Alternate gene names: 28210866

Gene position: 1253834-1254787 (Clockwise)

Preceding gene: 28210865

Following gene: 28210867

Centisome position: 44.79

GC content: 30.92

Gene sequence:

>954_bases
ATGAAAATTGGATTAGAGACAGAAAGTTATCATTTGCATTTTCAAAATAATAGAATGGATATATTTGATTTTATAAGAAA
AACAGCAGAACTAGGATTAGATGGAGTACAAATAAACATAATAAAAGATAAAAACTTAGATCCAGAATGGGGAACTCTTG
GTTCAAATGATCCTGAACATTTAGCTAAAGTAAGAAAAGAAATAGAAGAATATGGGTTATTTGTTGAGATTGATGCTAGG
GGAACAGAACCTAATAAGTTAAAAAAGGTTATAGATGTTGCTCATAGATTAGATGCAGATGTTATTAGAACTTATGTTAG
CTGTGGCGGAGATCTTCAAGAGGAAATAAGAAGAGCTCCAGAAGATATTAGAGAAGTATTACCTTTACTTAGAAAATATA
GGATAAAACTTGCACTAGAGAATCATGAATATGAAACAGCAAATGATATGATAAATATAGTAAAGGAAATAGGAAGTCCA
TGGGTAGGAATTACCTGTGACACTGGAAATGGAATGATGGTTTGGGAAGAGCCAAAGGAAACTATTGAAAAACTTGCCCC
ATATACTTTTACAACACATTTTAAAGATCATATTATTATAAAAGATGGAGATGACTACAGAGTTTGTGGTATTGCCATAG
GTGAAGGTAGTATGAATGTAGAAGAATGCTTTAAAATGTTAGTAGACAATACAACATTGACAAGAATAAATATAGAAATG
TGTCATCCTTATGTTGCTACATTTAAAAAAGAAGATAATGTAAATGGAGTATCGAAGCTAAATACAGGAGTATTTACAGT
TGAAAATCCACCACTTGATCCAGAAATCATTAAACCTAGTGAATATTACTATCCACCAGAACATTTGATAGATATGATGA
TTAAGTATCAAGATGAGGAAGTAAAAAAATCTGTAAAAAAAGTATTAGCTCTGAGGGATAAGTACTGCAGATAA

Upstream 100 bases:

>100_bases
CTATATTACTTAAAATAATAAAGAAGAAAAACATGGTATTAGAACAGGGGAAATAAACGCACAATAGCCTTTCTAATATT
AAATTAGAGGAGGAAATATC

Downstream 100 bases:

>100_bases
AACTATAAAATAATTAGTGTATACTATAAAAGCTGTTGATAAATATAAATTGTCAACAGCTTTTACTATATGATATAGCA
ATGGACTGAAACTATACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKIGLETESYHLHFQNNRMDIFDFIRKTAELGLDGVQINIIKDKNLDPEWGTLGSNDPEHLAKVRKEIEEYGLFVEIDAR
GTEPNKLKKVIDVAHRLDADVIRTYVSCGGDLQEEIRRAPEDIREVLPLLRKYRIKLALENHEYETANDMINIVKEIGSP
WVGITCDTGNGMMVWEEPKETIEKLAPYTFTTHFKDHIIIKDGDDYRVCGIAIGEGSMNVEECFKMLVDNTTLTRINIEM
CHPYVATFKKEDNVNGVSKLNTGVFTVENPPLDPEIIKPSEYYYPPEHLIDMMIKYQDEEVKKSVKKVLALRDKYCR

Sequences:

>Translated_317_residues
MKIGLETESYHLHFQNNRMDIFDFIRKTAELGLDGVQINIIKDKNLDPEWGTLGSNDPEHLAKVRKEIEEYGLFVEIDAR
GTEPNKLKKVIDVAHRLDADVIRTYVSCGGDLQEEIRRAPEDIREVLPLLRKYRIKLALENHEYETANDMINIVKEIGSP
WVGITCDTGNGMMVWEEPKETIEKLAPYTFTTHFKDHIIIKDGDDYRVCGIAIGEGSMNVEECFKMLVDNTTLTRINIEM
CHPYVATFKKEDNVNGVSKLNTGVFTVENPPLDPEIIKPSEYYYPPEHLIDMMIKYQDEEVKKSVKKVLALRDKYCR
>Mature_317_residues
MKIGLETESYHLHFQNNRMDIFDFIRKTAELGLDGVQINIIKDKNLDPEWGTLGSNDPEHLAKVRKEIEEYGLFVEIDAR
GTEPNKLKKVIDVAHRLDADVIRTYVSCGGDLQEEIRRAPEDIREVLPLLRKYRIKLALENHEYETANDMINIVKEIGSP
WVGITCDTGNGMMVWEEPKETIEKLAPYTFTTHFKDHIIIKDGDDYRVCGIAIGEGSMNVEECFKMLVDNTTLTRINIEM
CHPYVATFKKEDNVNGVSKLNTGVFTVENPPLDPEIIKPSEYYYPPEHLIDMMIKYQDEEVKKSVKKVLALRDKYCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790305, Length=312, Percent_Identity=22.4358974358974, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 36555; Mature: 36555

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGLETESYHLHFQNNRMDIFDFIRKTAELGLDGVQINIIKDKNLDPEWGTLGSNDPEH
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
LAKVRKEIEEYGLFVEIDARGTEPNKLKKVIDVAHRLDADVIRTYVSCGGDLQEEIRRAP
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCH
EDIREVLPLLRKYRIKLALENHEYETANDMINIVKEIGSPWVGITCDTGNGMMVWEEPKE
HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCHHH
TIEKLAPYTFTTHFKDHIIIKDGDDYRVCGIAIGEGSMNVEECFKMLVDNTTLTRINIEM
HHHHHCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEH
CHPYVATFKKEDNVNGVSKLNTGVFTVENPPLDPEIIKPSEYYYPPEHLIDMMIKYQDEE
HCHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCHH
VKKSVKKVLALRDKYCR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGLETESYHLHFQNNRMDIFDFIRKTAELGLDGVQINIIKDKNLDPEWGTLGSNDPEH
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
LAKVRKEIEEYGLFVEIDARGTEPNKLKKVIDVAHRLDADVIRTYVSCGGDLQEEIRRAP
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCH
EDIREVLPLLRKYRIKLALENHEYETANDMINIVKEIGSPWVGITCDTGNGMMVWEEPKE
HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCHHH
TIEKLAPYTFTTHFKDHIIIKDGDDYRVCGIAIGEGSMNVEECFKMLVDNTTLTRINIEM
HHHHHCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEH
CHPYVATFKKEDNVNGVSKLNTGVFTVENPPLDPEIIKPSEYYYPPEHLIDMMIKYQDEE
HCHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCHH
VKKSVKKVLALRDKYCR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]