| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is ykuE [H]
Identifier: 28210850
GI number: 28210850
Start: 1231968
End: 1233002
Strand: Direct
Name: ykuE [H]
Synonym: CTC01157
Alternate gene names: 28210850
Gene position: 1231968-1233002 (Clockwise)
Preceding gene: 28210848
Following gene: 28210851
Centisome position: 44.01
GC content: 27.44
Gene sequence:
>1035_bases ATGAGTAAGTGTTTTAGTTGGTATTTTATATTATTAAATTTATTAGGTATTTTATTAATGTATATAGATAAAGAAAAAGC TAAAAGAAGTAAATGGCGAATAAAGGAAAGTACTTTGTTGTCAGTAGCAGTGTTAGGAGGAAGTATAGGATCATATATAG GGATGAAAATATTTAGACATAAGACCAAACATGCTAAATTTAAATATGGAATTCCTTTTATAATATTAATTCAACTGTTG ATATTTTTATACTTGGGGAATAATAATATTTCAATATCACACTATTCCATAGAAAGTACAAAACTTCCACCTAAGTTCAA TGGATATAAAGTAGTTCAAATATCTGATTTACATAATAAAGTTTTTCCTAAAAATAATAAAAAATTAATAGGAAGTATTA AGAGTCAAAAGCCAGATGTCATTTTTATTACAGGAGATATTATAGATAGAAGAAGATATGATGAAGAAAAAGCATTAATG TTAATTAAAGAAATAAAATCTATAGCACCTATTTATTATGTACCTGGAAATCATGAGACTTGGTCAGGAAGATTTTTATC TTTAGAGAAGAAATTACTAAAAAATGGAGTAATAGTTCTAAGAAATAACTCTGTGTCAGTAAAAAGAGGAGAGGATGAAA TTTTTATTTATGGAGTAGATGATCCAGCATTTAATACAAAAGGCTACAGTGAGAATTATAAAGATTATAATATAGTAAAA GAAGAAATTGAAAAGATAAATAAGAAAGATTCATATAATGTACTCTTATGCCACAGATCAGAACTATTTTCACTATATGT TGATGAAAAAATAGATTTGGTTTTTACTGGTCATGCCTATGGAGGACAAGCTATATTACCTTTACTTGGAGGAGTTATAG CACCTAATCAGGGATTTTTTCCTTCATATTATAGAGGAGTTTATAATGATGGCAACACATATATGGTTGTAAGCAGAGGG CTTGGAAATAGTTTAGTGCCAATAAGACTGTTTAATCCTCCAGAATTAGTTGTAGTAAAAATGGAAAGGAAGTAA
Upstream 100 bases:
>100_bases TTTATGTTGATAATTATTTAAGGTTATAAAATTTAATGGTATAATTATGGTAAATTATTTGTTATTTATAAAAATAGATA TGTAAATAAGGAGAAACATT
Downstream 100 bases:
>100_bases AAGAAGGGACGGTTAAGTATAGAAAGTATTGTAGCATTCATATATTGACAATATTCATCATTCGCATAGGGTATACAGTG TAAAATAAGTATGATATTAT
Product: phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSKCFSWYFILLNLLGILLMYIDKEKAKRSKWRIKESTLLSVAVLGGSIGSYIGMKIFRHKTKHAKFKYGIPFIILIQLL IFLYLGNNNISISHYSIESTKLPPKFNGYKVVQISDLHNKVFPKNNKKLIGSIKSQKPDVIFITGDIIDRRRYDEEKALM LIKEIKSIAPIYYVPGNHETWSGRFLSLEKKLLKNGVIVLRNNSVSVKRGEDEIFIYGVDDPAFNTKGYSENYKDYNIVK EEIEKINKKDSYNVLLCHRSELFSLYVDEKIDLVFTGHAYGGQAILPLLGGVIAPNQGFFPSYYRGVYNDGNTYMVVSRG LGNSLVPIRLFNPPELVVVKMERK
Sequences:
>Translated_344_residues MSKCFSWYFILLNLLGILLMYIDKEKAKRSKWRIKESTLLSVAVLGGSIGSYIGMKIFRHKTKHAKFKYGIPFIILIQLL IFLYLGNNNISISHYSIESTKLPPKFNGYKVVQISDLHNKVFPKNNKKLIGSIKSQKPDVIFITGDIIDRRRYDEEKALM LIKEIKSIAPIYYVPGNHETWSGRFLSLEKKLLKNGVIVLRNNSVSVKRGEDEIFIYGVDDPAFNTKGYSENYKDYNIVK EEIEKINKKDSYNVLLCHRSELFSLYVDEKIDLVFTGHAYGGQAILPLLGGVIAPNQGFFPSYYRGVYNDGNTYMVVSRG LGNSLVPIRLFNPPELVVVKMERK >Mature_343_residues SKCFSWYFILLNLLGILLMYIDKEKAKRSKWRIKESTLLSVAVLGGSIGSYIGMKIFRHKTKHAKFKYGIPFIILIQLLI FLYLGNNNISISHYSIESTKLPPKFNGYKVVQISDLHNKVFPKNNKKLIGSIKSQKPDVIFITGDIIDRRRYDEEKALML IKEIKSIAPIYYVPGNHETWSGRFLSLEKKLLKNGVIVLRNNSVSVKRGEDEIFIYGVDDPAFNTKGYSENYKDYNIVKE EIEKINKKDSYNVLLCHRSELFSLYVDEKIDLVFTGHAYGGQAILPLLGGVIAPNQGFFPSYYRGVYNDGNTYMVVSRGL GNSLVPIRLFNPPELVVVKMERK
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Caenorhabditis elegans, GI115535028, Length=272, Percent_Identity=23.8970588235294, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115535030, Length=272, Percent_Identity=23.8970588235294, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71996034, Length=287, Percent_Identity=23.6933797909408, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 39429; Mature: 39297
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCFSWYFILLNLLGILLMYIDKEKAKRSKWRIKESTLLSVAVLGGSIGSYIGMKIFRH CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCEECHHHEEEEEECCCCHHHHHHHHHHHH KTKHAKFKYGIPFIILIQLLIFLYLGNNNISISHYSIESTKLPPKFNGYKVVQISDLHNK HHHCCEEECCCCHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCC VFPKNNKKLIGSIKSQKPDVIFITGDIIDRRRYDEEKALMLIKEIKSIAPIYYVPGNHET CCCCCCCEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCC WSGRFLSLEKKLLKNGVIVLRNNSVSVKRGEDEIFIYGVDDPAFNTKGYSENYKDYNIVK CCCEEHHHHHHHHHCCEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHH EEIEKINKKDSYNVLLCHRSELFSLYVDEKIDLVFTGHAYGGQAILPLLGGVIAPNQGFF HHHHHCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCHHHHHCCEECCCCCCC PSYYRGVYNDGNTYMVVSRGLGNSLVPIRLFNPPELVVVKMERK HHHHHHEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCC >Mature Secondary Structure SKCFSWYFILLNLLGILLMYIDKEKAKRSKWRIKESTLLSVAVLGGSIGSYIGMKIFRH CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCEECHHHEEEEEECCCCHHHHHHHHHHHH KTKHAKFKYGIPFIILIQLLIFLYLGNNNISISHYSIESTKLPPKFNGYKVVQISDLHNK HHHCCEEECCCCHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCC VFPKNNKKLIGSIKSQKPDVIFITGDIIDRRRYDEEKALMLIKEIKSIAPIYYVPGNHET CCCCCCCEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCC WSGRFLSLEKKLLKNGVIVLRNNSVSVKRGEDEIFIYGVDDPAFNTKGYSENYKDYNIVK CCCEEHHHHHHHHHCCEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHH EEIEKINKKDSYNVLLCHRSELFSLYVDEKIDLVFTGHAYGGQAILPLLGGVIAPNQGFF HHHHHCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCHHHHHCCEECCCCCCC PSYYRGVYNDGNTYMVVSRGLGNSLVPIRLFNPPELVVVKMERK HHHHHHEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]