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The map label for this gene is mcp3 [H]

Identifier: 28210848

GI number: 28210848

Start: 1227261

End: 1228748

Strand: Direct

Name: mcp3 [H]

Synonym: CTC01155

Alternate gene names: 28210848

Gene position: 1227261-1228748 (Clockwise)

Preceding gene: 28210844

Following gene: 28210850

Centisome position: 43.84

GC content: 29.84

Gene sequence:

>1488_bases
TTGAAAAAGTTTAAGATTTTTGAAAAAAAGCCATGCTATGAAGCAGAGTGTATTATTAAATATGTAGAGGAGAGATTAGA
AGGAAATAAAACTTTAGAACCTAAAGTGGAATATCCTATACATGTTAAATTACTAAAAAATTATAAAAAGCTTTTCTCTA
ATGAAGGAATTATGTCATCGTCAGCAAAAACATTATTAGATATAAATGCATCTTTAAGTGACTTTGATGTGCAAATGTCT
AGTATTTCTTATGAACTAATTGATTTTGCAAAAGAAATGTCTGAACTCAGTGAATCAAATCTAGCAGTGGTAGAAGAAAT
TACAGCTAGCATGAATCAGGTTAATCATACTATAGAGGATACATCTAAAACTTTAGAGGATTTATCCATATCCTCAAAGG
AATTGATAGAAGAAAACCATAAAAGTCTTGCTGAGATTGAGGATATTAATCATTTAAAAGAAGAAGTAATGAATAATGCA
AATATTATGAGTAGCCAAATTGAAGAATTGGTTGAAATGGCCAACAAAGTAAGTGACATTGTAGAAGGAGTTGGGGCTAT
AGCGGATCAAACAAATTTACTAGCTTTAAATGCATCCATTGAAGCAGCACGTGCTGGAGAACATGGTAAAGGATTTGCAG
TGGTAGCTCAAGAAATTCGTAAATTAGCAGATGACACCAAAGGCAGTCTTCAAAACATGAGAAACTTTGTAAATAATATT
CAGAATACTTCTAGAGAAGGAAAAAAGAGTATGGATAATACCATATCTTCTACAGAAAAAATGAGTAAAAAAATTGATGC
TATAACATATACTACAAAAAGTAATGTGGACATGCTTGAGGATTCGGTAAGAAGTATATATACAATTAATGAATCTATGG
GAGGAATAAATTTAGCGGCAACGGAAATTAATAAAGCTATGGACACATCCACCCAAGATGCAGAAAAATTAAGTCTTATG
ACAAATACAATTCATGATAATGCATTAAAAAGTGCAGATTATGCTAAGAAAATTTCAAATATAGATGATTTATTATCAGA
AGTTTTAAAACATATGATGGGAGGCCTTCAGGGAACTATAAATGCTATTAGCAATGAGGAATTTTTAGAGTATATGGAGA
AGGCAAAAAAAGCTCATAAAAACTGGTTAGAAAATTTAAAAAATATTGTGAATGAAATGAGAATATATCCTCTACAAACA
AATGGAGCTAAATGTGCTTTTGGTCACTTTTATAATTCTATACAAGCGACTCATCCATCAATTTTAGAGGAATGGAAGGG
TATTGATAATATTCACAAAGAATTTCATAATTTAGGGGATAAAGTGTTAAAGTCCGTAAAAGAGAATAATAAGCATAAGG
CACAAGAATATTACGATTCTGCTGAAAAAATATCAAAAGAAATATTTATGAGTATGGATAAAATAATTATAGAATCAAAA
AAGCAAATGGAAAAAGGTGTACAGTTATTCCAACAAATAAAAAATTAG

Upstream 100 bases:

>100_bases
TTAAATTTAGTAATATGCCAAAAATAATTAATTCAATAATTTATACAATAAAAGAGTTTTTAAATATATTATAAAAAATA
GATAAGGATGTGCAGTATAC

Downstream 100 bases:

>100_bases
CTTTTAAAATTAAAAATATAGGGGACGGTTAATGTATTATGATAAATTTAATGGTGATAGAATCGGCTACCACCATTAAA
TATTTGGGAAAACTACATTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MKKFKIFEKKPCYEAECIIKYVEERLEGNKTLEPKVEYPIHVKLLKNYKKLFSNEGIMSSSAKTLLDINASLSDFDVQMS
SISYELIDFAKEMSELSESNLAVVEEITASMNQVNHTIEDTSKTLEDLSISSKELIEENHKSLAEIEDINHLKEEVMNNA
NIMSSQIEELVEMANKVSDIVEGVGAIADQTNLLALNASIEAARAGEHGKGFAVVAQEIRKLADDTKGSLQNMRNFVNNI
QNTSREGKKSMDNTISSTEKMSKKIDAITYTTKSNVDMLEDSVRSIYTINESMGGINLAATEINKAMDTSTQDAEKLSLM
TNTIHDNALKSADYAKKISNIDDLLSEVLKHMMGGLQGTINAISNEEFLEYMEKAKKAHKNWLENLKNIVNEMRIYPLQT
NGAKCAFGHFYNSIQATHPSILEEWKGIDNIHKEFHNLGDKVLKSVKENNKHKAQEYYDSAEKISKEIFMSMDKIIIESK
KQMEKGVQLFQQIKN

Sequences:

>Translated_495_residues
MKKFKIFEKKPCYEAECIIKYVEERLEGNKTLEPKVEYPIHVKLLKNYKKLFSNEGIMSSSAKTLLDINASLSDFDVQMS
SISYELIDFAKEMSELSESNLAVVEEITASMNQVNHTIEDTSKTLEDLSISSKELIEENHKSLAEIEDINHLKEEVMNNA
NIMSSQIEELVEMANKVSDIVEGVGAIADQTNLLALNASIEAARAGEHGKGFAVVAQEIRKLADDTKGSLQNMRNFVNNI
QNTSREGKKSMDNTISSTEKMSKKIDAITYTTKSNVDMLEDSVRSIYTINESMGGINLAATEINKAMDTSTQDAEKLSLM
TNTIHDNALKSADYAKKISNIDDLLSEVLKHMMGGLQGTINAISNEEFLEYMEKAKKAHKNWLENLKNIVNEMRIYPLQT
NGAKCAFGHFYNSIQATHPSILEEWKGIDNIHKEFHNLGDKVLKSVKENNKHKAQEYYDSAEKISKEIFMSMDKIIIESK
KQMEKGVQLFQQIKN
>Mature_495_residues
MKKFKIFEKKPCYEAECIIKYVEERLEGNKTLEPKVEYPIHVKLLKNYKKLFSNEGIMSSSAKTLLDINASLSDFDVQMS
SISYELIDFAKEMSELSESNLAVVEEITASMNQVNHTIEDTSKTLEDLSISSKELIEENHKSLAEIEDINHLKEEVMNNA
NIMSSQIEELVEMANKVSDIVEGVGAIADQTNLLALNASIEAARAGEHGKGFAVVAQEIRKLADDTKGSLQNMRNFVNNI
QNTSREGKKSMDNTISSTEKMSKKIDAITYTTKSNVDMLEDSVRSIYTINESMGGINLAATEINKAMDTSTQDAEKLSLM
TNTIHDNALKSADYAKKISNIDDLLSEVLKHMMGGLQGTINAISNEEFLEYMEKAKKAHKNWLENLKNIVNEMRIYPLQT
NGAKCAFGHFYNSIQATHPSILEEWKGIDNIHKEFHNLGDKVLKSVKENNKHKAQEYYDSAEKISKEIFMSMDKIIIESK
KQMEKGVQLFQQIKN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI2367378, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=25.8620689655172, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788195, Length=301, Percent_Identity=25.9136212624585, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787690, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 55855; Mature: 55855

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKIFEKKPCYEAECIIKYVEERLEGNKTLEPKVEYPIHVKLLKNYKKLFSNEGIMSS
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
SAKTLLDINASLSDFDVQMSSISYELIDFAKEMSELSESNLAVVEEITASMNQVNHTIED
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TSKTLEDLSISSKELIEENHKSLAEIEDINHLKEEVMNNANIMSSQIEELVEMANKVSDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VEGVGAIADQTNLLALNASIEAARAGEHGKGFAVVAQEIRKLADDTKGSLQNMRNFVNNI
HHHHHHHHCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QNTSREGKKSMDNTISSTEKMSKKIDAITYTTKSNVDMLEDSVRSIYTINESMGGINLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHH
TEINKAMDTSTQDAEKLSLMTNTIHDNALKSADYAKKISNIDDLLSEVLKHMMGGLQGTI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
NAISNEEFLEYMEKAKKAHKNWLENLKNIVNEMRIYPLQTNGAKCAFGHFYNSIQATHPS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCHH
ILEEWKGIDNIHKEFHNLGDKVLKSVKENNKHKAQEYYDSAEKISKEIFMSMDKIIIESK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQMEKGVQLFQQIKN
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFKIFEKKPCYEAECIIKYVEERLEGNKTLEPKVEYPIHVKLLKNYKKLFSNEGIMSS
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
SAKTLLDINASLSDFDVQMSSISYELIDFAKEMSELSESNLAVVEEITASMNQVNHTIED
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TSKTLEDLSISSKELIEENHKSLAEIEDINHLKEEVMNNANIMSSQIEELVEMANKVSDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VEGVGAIADQTNLLALNASIEAARAGEHGKGFAVVAQEIRKLADDTKGSLQNMRNFVNNI
HHHHHHHHCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QNTSREGKKSMDNTISSTEKMSKKIDAITYTTKSNVDMLEDSVRSIYTINESMGGINLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHH
TEINKAMDTSTQDAEKLSLMTNTIHDNALKSADYAKKISNIDDLLSEVLKHMMGGLQGTI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
NAISNEEFLEYMEKAKKAHKNWLENLKNIVNEMRIYPLQTNGAKCAFGHFYNSIQATHPS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCHH
ILEEWKGIDNIHKEFHNLGDKVLKSVKENNKHKAQEYYDSAEKISKEIFMSMDKIIIESK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQMEKGVQLFQQIKN
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]