| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yqgI [H]
Identifier: 28210828
GI number: 28210828
Start: 1199522
End: 1200409
Strand: Direct
Name: yqgI [H]
Synonym: CTC01134
Alternate gene names: 28210828
Gene position: 1199522-1200409 (Clockwise)
Preceding gene: 28210827
Following gene: 28210829
Centisome position: 42.85
GC content: 33.22
Gene sequence:
>888_bases ATGAATGTTAAAATACAGGATAAAATTTGGACTACAATATTGTATTTTATATCGGCCTTTATGATGTTTTTATTAATTTA TTTAATAGGATATATACTGATAGAAGGTATAGGACATATAAGCCTCTCTTTTCTCACCACAGATCCTTTAATAGGGGAAG TTGGTGGAGGAATTGCACCTCAGTTATTTAATTCTTTTTACATGCTTATAATTTCATTATTAATGACAATACCTATAAGT ATTGGAGCAGGTATTTATTTAGCAGAATATGCGCAGGAAGGACCTATATTAAACATAATAAGGCTTAGTATAGAAACCAT GGCATCCCTTCCATCCATTGTAGTAGGTCTTTTTGGATTACTTATATTTGTAAAAGCTACAGGTTGGGGATTTACCTTAT TATCTGGTGCATTAGCTATAAGCATATTAAATCTTCCATCTATGACTAGAATTTCTGAAAATGCCATAAGAATTTCTTCA AAGGGACTAAAAGAGGGTAGTATTGCCTTAGGAGCAACTAGGTGGCAAACTATGAAGAATGTTATACTTCCTGTAGCTAC CCCTCAAATACTTACAGGAATAATACTTGCAGGGGGAAGAATATTTGGAGAAGCAGCAGCATTATTATATACATCTGGAA TGAGTGCACCACCATTATCATTCTCTTTGGAAAATATTTTTTCTGTTAATTCTCCCTTCAATCCTATGAGACCAGCAGAA ACATTAGCAGTGTATATTTGGCAGGTGAATTCGGAGGGAATGATACCAGATGCTACAAAGGTTGGAAGTGCATCTTCAGC AATACTTATAATAATGGTTCTAATATTTAATATAATGGCAAGAATTATAGGAAATTTAATACACAGAAAGTATGTAGGGG AAAAGTAA
Upstream 100 bases:
>100_bases TGGAACGATGCACTATGGGCATTAGCATCTATATTATTATTTATTTCTTTTATGTTTATTATAACTATAAGATTTATAGC TGGAAGGGGGAGATAAAATA
Downstream 100 bases:
>100_bases GGGGGATAATATGAACATAGTAAAAATAAAGGATTTAAGTTTGTTTTATGGAAAAACTCATGCTTTAAAAAACATAAATA TGAATATAGAAAAAAATAAA
Product: ABC transporter permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNVKIQDKIWTTILYFISAFMMFLLIYLIGYILIEGIGHISLSFLTTDPLIGEVGGGIAPQLFNSFYMLIISLLMTIPIS IGAGIYLAEYAQEGPILNIIRLSIETMASLPSIVVGLFGLLIFVKATGWGFTLLSGALAISILNLPSMTRISENAIRISS KGLKEGSIALGATRWQTMKNVILPVATPQILTGIILAGGRIFGEAAALLYTSGMSAPPLSFSLENIFSVNSPFNPMRPAE TLAVYIWQVNSEGMIPDATKVGSASSAILIIMVLIFNIMARIIGNLIHRKYVGEK
Sequences:
>Translated_295_residues MNVKIQDKIWTTILYFISAFMMFLLIYLIGYILIEGIGHISLSFLTTDPLIGEVGGGIAPQLFNSFYMLIISLLMTIPIS IGAGIYLAEYAQEGPILNIIRLSIETMASLPSIVVGLFGLLIFVKATGWGFTLLSGALAISILNLPSMTRISENAIRISS KGLKEGSIALGATRWQTMKNVILPVATPQILTGIILAGGRIFGEAAALLYTSGMSAPPLSFSLENIFSVNSPFNPMRPAE TLAVYIWQVNSEGMIPDATKVGSASSAILIIMVLIFNIMARIIGNLIHRKYVGEK >Mature_295_residues MNVKIQDKIWTTILYFISAFMMFLLIYLIGYILIEGIGHISLSFLTTDPLIGEVGGGIAPQLFNSFYMLIISLLMTIPIS IGAGIYLAEYAQEGPILNIIRLSIETMASLPSIVVGLFGLLIFVKATGWGFTLLSGALAISILNLPSMTRISENAIRISS KGLKEGSIALGATRWQTMKNVILPVATPQILTGIILAGGRIFGEAAALLYTSGMSAPPLSFSLENIFSVNSPFNPMRPAE TLAVYIWQVNSEGMIPDATKVGSASSAILIIMVLIFNIMARIIGNLIHRKYVGEK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=287, Percent_Identity=32.404181184669, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1790164, Length=204, Percent_Identity=24.0196078431373, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31877; Mature: 31877
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKIQDKIWTTILYFISAFMMFLLIYLIGYILIEGIGHISLSFLTTDPLIGEVGGGIAP CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCHHH QLFNSFYMLIISLLMTIPISIGAGIYLAEYAQEGPILNIIRLSIETMASLPSIVVGLFGL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIFVKATGWGFTLLSGALAISILNLPSMTRISENAIRISSKGLKEGSIALGATRWQTMKN HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCEEECHHHHHHHHH VILPVATPQILTGIILAGGRIFGEAAALLYTSGMSAPPLSFSLENIFSVNSPFNPMRPAE HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH TLAVYIWQVNSEGMIPDATKVGSASSAILIIMVLIFNIMARIIGNLIHRKYVGEK EEEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNVKIQDKIWTTILYFISAFMMFLLIYLIGYILIEGIGHISLSFLTTDPLIGEVGGGIAP CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCHHH QLFNSFYMLIISLLMTIPISIGAGIYLAEYAQEGPILNIIRLSIETMASLPSIVVGLFGL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIFVKATGWGFTLLSGALAISILNLPSMTRISENAIRISSKGLKEGSIALGATRWQTMKN HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCEEECHHHHHHHHH VILPVATPQILTGIILAGGRIFGEAAALLYTSGMSAPPLSFSLENIFSVNSPFNPMRPAE HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH TLAVYIWQVNSEGMIPDATKVGSASSAILIIMVLIFNIMARIIGNLIHRKYVGEK EEEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]