| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is pstC [H]
Identifier: 28210827
GI number: 28210827
Start: 1198597
End: 1199517
Strand: Direct
Name: pstC [H]
Synonym: CTC01133
Alternate gene names: 28210827
Gene position: 1198597-1199517 (Clockwise)
Preceding gene: 28210826
Following gene: 28210828
Centisome position: 42.82
GC content: 30.62
Gene sequence:
>921_bases ATGGAGGAGAGCTTAACAAAGAAGAAACTAAACATAAATAAAAGAAATATATTGAAAAAATTTATAAATGAATATATAGG AAGAACATTTTCTACATTATGTGGGATTTTTATAGTAATATTAACTTTTTTAATCATATGCTTTATATTTTTAAAGGGCA TAAATATATTCCTAAAAGATGGATATTCCTTAAAAGAGTTTATATTTTCTTCTAGTTGGAATCCTGATGGGGAAAATCCA ACATTTGGATCTAAAATATTTATATTAGGATCAATTTTAGTATCTCTAGGTGCGCTTTTAATATCTACCCCAATTAGTAT AGCGTTAGCTGTTTTTATGAATCATATATCTCCTAAATTAGGTCAGAAATTTCTTCAACCAGCATTAGAATTATTTGTAG GAATACCCTCAGTAGTATATGGATGGATAGGGATAGTTCTATTCATCCCCATTATTAAAAGAAGCTTTGGAGGACTAGGA TTTAGTTTACTTGCAGGAATGATTGTTTTATCAATAATGATACTTCCGACTATAGTTAATATATCCTCTGATGCTATAAA ATCCATACCTAAAGATTATGTAGAGGCATCCTTAGCGTTGGGAGCAACTAGATGGCAAACTATTATAAAGGTTGTATTAC CTTCTGCTAAAAGTGGAATACTTACATCCATAGTTTTAGGATTAGCAAGAGCTTTTGGAGAAGCTCTTGCAGTACAAATG GTTATAGGTAATACCATTAAGCTACCAAGAGGAGTATTAGATCCTACTGCTACCTTAACATCTATACTAACTATGGATAT GGCAAATACAGTATCAGGAACTCCTTGGAACGATGCACTATGGGCATTAGCATCTATATTATTATTTATTTCTTTTATGT TTATTATAACTATAAGATTTATAGCTGGAAGGGGGAGATAA
Upstream 100 bases:
>100_bases ATTTCTTGATTATATGACAAGTGATGACAATAAAGCAGTAGTTGAAAAATTAGGCTATATTCCTATGGGAAATTTAAAAT AAAGGGAAGTAGGTAATTAT
Downstream 100 bases:
>100_bases AATAATGAATGTTAAAATACAGGATAAAATTTGGACTACAATATTGTATTTTATATCGGCCTTTATGATGTTTTTATTAA TTTATTTAATAGGATATATA
Product: phosphate transport system permease protein pstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MEESLTKKKLNINKRNILKKFINEYIGRTFSTLCGIFIVILTFLIICFIFLKGINIFLKDGYSLKEFIFSSSWNPDGENP TFGSKIFILGSILVSLGALLISTPISIALAVFMNHISPKLGQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLG FSLLAGMIVLSIMILPTIVNISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGILTSIVLGLARAFGEALAVQM VIGNTIKLPRGVLDPTATLTSILTMDMANTVSGTPWNDALWALASILLFISFMFIITIRFIAGRGR
Sequences:
>Translated_306_residues MEESLTKKKLNINKRNILKKFINEYIGRTFSTLCGIFIVILTFLIICFIFLKGINIFLKDGYSLKEFIFSSSWNPDGENP TFGSKIFILGSILVSLGALLISTPISIALAVFMNHISPKLGQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLG FSLLAGMIVLSIMILPTIVNISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGILTSIVLGLARAFGEALAVQM VIGNTIKLPRGVLDPTATLTSILTMDMANTVSGTPWNDALWALASILLFISFMFIITIRFIAGRGR >Mature_306_residues MEESLTKKKLNINKRNILKKFINEYIGRTFSTLCGIFIVILTFLIICFIFLKGINIFLKDGYSLKEFIFSSSWNPDGENP TFGSKIFILGSILVSLGALLISTPISIALAVFMNHISPKLGQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLG FSLLAGMIVLSIMILPTIVNISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGILTSIVLGLARAFGEALAVQM VIGNTIKLPRGVLDPTATLTSILTMDMANTVSGTPWNDALWALASILLFISFMFIITIRFIAGRGR
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=259, Percent_Identity=33.5907335907336, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1790163, Length=239, Percent_Identity=25.5230125523013, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33365; Mature: 33365
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESLTKKKLNINKRNILKKFINEYIGRTFSTLCGIFIVILTFLIICFIFLKGINIFLKD CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GYSLKEFIFSSSWNPDGENPTFGSKIFILGSILVSLGALLISTPISIALAVFMNHISPKL CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLGFSLLAGMIVLSIMILPTIVN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGILTSIVLGLARAFGEALAVQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VIGNTIKLPRGVLDPTATLTSILTMDMANTVSGTPWNDALWALASILLFISFMFIITIRF HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IAGRGR HHCCCC >Mature Secondary Structure MEESLTKKKLNINKRNILKKFINEYIGRTFSTLCGIFIVILTFLIICFIFLKGINIFLKD CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GYSLKEFIFSSSWNPDGENPTFGSKIFILGSILVSLGALLISTPISIALAVFMNHISPKL CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GQKFLQPALELFVGIPSVVYGWIGIVLFIPIIKRSFGGLGFSLLAGMIVLSIMILPTIVN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ISSDAIKSIPKDYVEASLALGATRWQTIIKVVLPSAKSGILTSIVLGLARAFGEALAVQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VIGNTIKLPRGVLDPTATLTSILTMDMANTVSGTPWNDALWALASILLFISFMFIITIRF HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IAGRGR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]