| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210812
Identifier: 28210812
GI number: 28210812
Start: 1181224
End: 1182288
Strand: Direct
Name: 28210812
Synonym: CTC01113
Alternate gene names: NA
Gene position: 1181224-1182288 (Clockwise)
Preceding gene: 28210811
Following gene: 28210813
Centisome position: 42.2
GC content: 22.35
Gene sequence:
>1065_bases ATGGAGGATGTTATGAATAGAGAACTATATAAAAATTTAATCAATAATACAATTGAATATTATTTACCGGAATATAATTT GCAACAAATAATAAATAATTTAACAAAACAAAAAATAGCAAGTTATAAAGAAAAAGAAAATAGTGTTTTAATTAATACAT CTGAATCAAAAAGCCAAAGGATTAAGAAATGTATTGATAATAATTCAGATACGTTTTACATAATAGAAAATATGCTTATA AATAAAGCATACAGATATGCTATTTACTATAAATGTGATAATTTTAACCTTAATGATAATATAGAAAATTATATTGATAT TGAAAGTTTAAAATGTGAAAAATTTAATTTGATTGAAGAATTTGATAAACCTATATTTGTACAGACTGACGATTACATTG CATTTAAATTTTGTAAATCTATAAATCCTTTTATTATTAAATTAGATCAAACAAAAGATGTTTTTTATTCTACATTGTGG GTTTATCATAAAAAGATGAAAATATTAGAACATAGATTTGATATGATAGGGTTTAAATCTGATGATACTTTTTATGAGAC TACATTTAAACCACAATTGTACAAAATATGTACAGATTTTAATTGTACTATTAATGAATTTAGAACAAGTAAAATAATAA AATGTATTGTACAGAATAAAAAAGATGAAGTAAATGAAATTTCACAATGTATGGGTTTAAAAGCTGATAGTTTGGCAAAA CTAAAAGCAGGTAAAACTTTAGTAATGCCATTCATAGGAGATTTAGAAATTATTATGGAAGAGAGTAAAGAGCTATTTGA CAAAACTAATGAAACAAAGTTAATAAAAAAAATGTTAGAGAAATATATTAACAATATAAAAGAAAATGCCAAATATAAAT CAAGATTACTGTCTTGGTGTAAAGGAGAATATAATTCTCTTTGTGTAAATATATTATTTAGTTATAGAGATAAAAACTAT GATTTGTTTAATTTCCAGGATCCTAAAAAAATTAATATGGAGTTGATGAATTATGCCATCGAATATATATGGGGGATTAG AGGGGATATTGAAAATATTAGATGA
Upstream 100 bases:
>100_bases AGAAACCACCGTGAATGGAACTAAAATGGTTTCTTAAAAATGATGGTATTTCATTGTTTATACTTCTATTATACTAGTAT ATTCTCTGAAATACAATATA
Downstream 100 bases:
>100_bases CAAACAGATTGAAAGTTTGAAAAGCTTTTTAGAATATCAATATAAGAGTCATGTTTCTTGTAGCGATATAGCTAATAGAC TTGATATTACATATGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MEDVMNRELYKNLINNTIEYYLPEYNLQQIINNLTKQKIASYKEKENSVLINTSESKSQRIKKCIDNNSDTFYIIENMLI NKAYRYAIYYKCDNFNLNDNIENYIDIESLKCEKFNLIEEFDKPIFVQTDDYIAFKFCKSINPFIIKLDQTKDVFYSTLW VYHKKMKILEHRFDMIGFKSDDTFYETTFKPQLYKICTDFNCTINEFRTSKIIKCIVQNKKDEVNEISQCMGLKADSLAK LKAGKTLVMPFIGDLEIIMEESKELFDKTNETKLIKKMLEKYINNIKENAKYKSRLLSWCKGEYNSLCVNILFSYRDKNY DLFNFQDPKKINMELMNYAIEYIWGIRGDIENIR
Sequences:
>Translated_354_residues MEDVMNRELYKNLINNTIEYYLPEYNLQQIINNLTKQKIASYKEKENSVLINTSESKSQRIKKCIDNNSDTFYIIENMLI NKAYRYAIYYKCDNFNLNDNIENYIDIESLKCEKFNLIEEFDKPIFVQTDDYIAFKFCKSINPFIIKLDQTKDVFYSTLW VYHKKMKILEHRFDMIGFKSDDTFYETTFKPQLYKICTDFNCTINEFRTSKIIKCIVQNKKDEVNEISQCMGLKADSLAK LKAGKTLVMPFIGDLEIIMEESKELFDKTNETKLIKKMLEKYINNIKENAKYKSRLLSWCKGEYNSLCVNILFSYRDKNY DLFNFQDPKKINMELMNYAIEYIWGIRGDIENIR >Mature_354_residues MEDVMNRELYKNLINNTIEYYLPEYNLQQIINNLTKQKIASYKEKENSVLINTSESKSQRIKKCIDNNSDTFYIIENMLI NKAYRYAIYYKCDNFNLNDNIENYIDIESLKCEKFNLIEEFDKPIFVQTDDYIAFKFCKSINPFIIKLDQTKDVFYSTLW VYHKKMKILEHRFDMIGFKSDDTFYETTFKPQLYKICTDFNCTINEFRTSKIIKCIVQNKKDEVNEISQCMGLKADSLAK LKAGKTLVMPFIGDLEIIMEESKELFDKTNETKLIKKMLEKYINNIKENAKYKSRLLSWCKGEYNSLCVNILFSYRDKNY DLFNFQDPKKINMELMNYAIEYIWGIRGDIENIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42354; Mature: 42354
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDVMNRELYKNLINNTIEYYLPEYNLQQIINNLTKQKIASYKEKENSVLINTSESKSQR CCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH IKKCIDNNSDTFYIIENMLINKAYRYAIYYKCDNFNLNDNIENYIDIESLKCEKFNLIEE HHHHHCCCCCEEEEHHHHHHHHHEEEEEEEEECCCCCCCCCCHHEEHHHCCCHHHHHHHH FDKPIFVQTDDYIAFKFCKSINPFIIKLDQTKDVFYSTLWVYHKKMKILEHRFDMIGFKS CCCCEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDTFYETTFKPQLYKICTDFNCTINEFRTSKIIKCIVQNKKDEVNEISQCMGLKADSLAK CCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH LKAGKTLVMPFIGDLEIIMEESKELFDKTNETKLIKKMLEKYINNIKENAKYKSRLLSWC HHCCCEEEECHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEYNSLCVNILFSYRDKNYDLFNFQDPKKINMELMNYAIEYIWGIRGDIENIR CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEDVMNRELYKNLINNTIEYYLPEYNLQQIINNLTKQKIASYKEKENSVLINTSESKSQR CCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH IKKCIDNNSDTFYIIENMLINKAYRYAIYYKCDNFNLNDNIENYIDIESLKCEKFNLIEE HHHHHCCCCCEEEEHHHHHHHHHEEEEEEEEECCCCCCCCCCHHEEHHHCCCHHHHHHHH FDKPIFVQTDDYIAFKFCKSINPFIIKLDQTKDVFYSTLWVYHKKMKILEHRFDMIGFKS CCCCEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDTFYETTFKPQLYKICTDFNCTINEFRTSKIIKCIVQNKKDEVNEISQCMGLKADSLAK CCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH LKAGKTLVMPFIGDLEIIMEESKELFDKTNETKLIKKMLEKYINNIKENAKYKSRLLSWC HHCCCEEEECHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGEYNSLCVNILFSYRDKNYDLFNFQDPKKINMELMNYAIEYIWGIRGDIENIR CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA