| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210796
Identifier: 28210796
GI number: 28210796
Start: 1163403
End: 1163822
Strand: Direct
Name: 28210796
Synonym: CTC01095
Alternate gene names: NA
Gene position: 1163403-1163822 (Clockwise)
Preceding gene: 28210795
Following gene: 28210797
Centisome position: 41.56
GC content: 29.29
Gene sequence:
>420_bases ATGAGTAGTTTTAATTATAAAGTTCCAGGAGATAAGTTACAGGAGGATTTAATAAATAGTGCAATCCCCCAAACGTTATG GCAGAAAATATATTTACACTTAAAAAAACTAGGATATAAAGTGTATTCTCCTGGACAAAAAAGAGATAAATGCACAGAAC CATATCTAGTAATAAAAGAAAATGGAACCTATGCATTGAATAGCAATGTTAATGGTTATAAGCTATTTGATATTATTATT TATCATCCTATGTCTAATTATTCTACTATGGAGTTTTATGTGGAGAATATAAAACAAGCTATGAAAGATATAACAGAATT AAGACCTACAGGTAATGAAACACCAGCAATTATTGATGAAAAAATAGAAGCTTATACTGCTAGCATAGAGTACCAACAAT TCAAGAGTTTAAGGAGGTAA
Upstream 100 bases:
>100_bases TTGGCAATGGATAAGCAGTATAGCATTCTCAACCCTACTGTAAATAAACTAGGTGCTGAAATACTAAGTGGTATGAATAA TTTGTTAGGAAAGTGATTAA
Downstream 100 bases:
>100_bases TAATATGGATGGTAAAACATTAGTTAATGTAATTAAGGTAAATTTTATTGATGAGGTTACAAATATAAAACATACAATTG AAACTTCTGATGAAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSSFNYKVPGDKLQEDLINSAIPQTLWQKIYLHLKKLGYKVYSPGQKRDKCTEPYLVIKENGTYALNSNVNGYKLFDIII YHPMSNYSTMEFYVENIKQAMKDITELRPTGNETPAIIDEKIEAYTASIEYQQFKSLRR
Sequences:
>Translated_139_residues MSSFNYKVPGDKLQEDLINSAIPQTLWQKIYLHLKKLGYKVYSPGQKRDKCTEPYLVIKENGTYALNSNVNGYKLFDIII YHPMSNYSTMEFYVENIKQAMKDITELRPTGNETPAIIDEKIEAYTASIEYQQFKSLRR >Mature_138_residues SSFNYKVPGDKLQEDLINSAIPQTLWQKIYLHLKKLGYKVYSPGQKRDKCTEPYLVIKENGTYALNSNVNGYKLFDIIIY HPMSNYSTMEFYVENIKQAMKDITELRPTGNETPAIIDEKIEAYTASIEYQQFKSLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16231; Mature: 16100
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFNYKVPGDKLQEDLINSAIPQTLWQKIYLHLKKLGYKVYSPGQKRDKCTEPYLVIKE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC NGTYALNSNVNGYKLFDIIIYHPMSNYSTMEFYVENIKQAMKDITELRPTGNETPAIIDE CCCEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH KIEAYTASIEYQQFKSLRR HHHHHHHHCCHHHHHHHCC >Mature Secondary Structure SSFNYKVPGDKLQEDLINSAIPQTLWQKIYLHLKKLGYKVYSPGQKRDKCTEPYLVIKE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC NGTYALNSNVNGYKLFDIIIYHPMSNYSTMEFYVENIKQAMKDITELRPTGNETPAIIDE CCCEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH KIEAYTASIEYQQFKSLRR HHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA