| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210794
Identifier: 28210794
GI number: 28210794
Start: 1162684
End: 1163049
Strand: Direct
Name: 28210794
Synonym: CTC01093
Alternate gene names: NA
Gene position: 1162684-1163049 (Clockwise)
Preceding gene: 28210793
Following gene: 28210795
Centisome position: 41.54
GC content: 28.69
Gene sequence:
>366_bases ATGAGTAAAATTAATAGAGGAAAAATAAGCAGGCAGATATATAAGCAATTAGAGAAAAAAGGGTTATTAAAGGAAATTAA GATATTAAGAAATGGTAAAAATGCTTATGGAGAGAAATTGGAGGATTTATATGTAACAACTATTAAGGGTTATTACTACA GGGAAAAAAGTAAGATAAATATCAGTACAGATACAGGAGCAGCCATAAATACTGATTATCGTGAGAAACTATTAGTTACC TACAATGAAGAAAGTAAAAAGATAAAGCAAGACGATTATTTAACATCAGATGGCATTAAATACAAAGTAATTGATACAGG GAATGTAGAAAATATAGTCTTCGATATGTATTTGGATAGGATGTGA
Upstream 100 bases:
>100_bases ATTGGTTAGGATTAGCAGAGGAATATAAAAAAGCATATGAAGAAAGTTTGCAAGGGACTATAACAGGATATAAAACATCA ATGAAAAGAGTTGATGGACA
Downstream 100 bases:
>100_bases TATTATGAGTTTTAAGTTTGATATAGAAAGTGTTATTAATGGATTATCTGAATTTGAAGTGAAAAGCAAAGCAGCCATAG GAGTTTACGCTGATACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKINRGKISRQIYKQLEKKGLLKEIKILRNGKNAYGEKLEDLYVTTIKGYYYREKSKINISTDTGAAINTDYREKLLVT YNEESKKIKQDDYLTSDGIKYKVIDTGNVENIVFDMYLDRM
Sequences:
>Translated_121_residues MSKINRGKISRQIYKQLEKKGLLKEIKILRNGKNAYGEKLEDLYVTTIKGYYYREKSKINISTDTGAAINTDYREKLLVT YNEESKKIKQDDYLTSDGIKYKVIDTGNVENIVFDMYLDRM >Mature_120_residues SKINRGKISRQIYKQLEKKGLLKEIKILRNGKNAYGEKLEDLYVTTIKGYYYREKSKINISTDTGAAINTDYREKLLVTY NEESKKIKQDDYLTSDGIKYKVIDTGNVENIVFDMYLDRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14193; Mature: 14061
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKINRGKISRQIYKQLEKKGLLKEIKILRNGKNAYGEKLEDLYVTTIKGYYYREKSKIN CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCEEEECCCEEE ISTDTGAAINTDYREKLLVTYNEESKKIKQDDYLTSDGIKYKVIDTGNVENIVFDMYLDR EECCCCCEECCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHEEEEECC M C >Mature Secondary Structure SKINRGKISRQIYKQLEKKGLLKEIKILRNGKNAYGEKLEDLYVTTIKGYYYREKSKIN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCEEEECCCEEE ISTDTGAAINTDYREKLLVTYNEESKKIKQDDYLTSDGIKYKVIDTGNVENIVFDMYLDR EECCCCCEECCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHEEEEECC M C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA