| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210788
Identifier: 28210788
GI number: 28210788
Start: 1155935
End: 1157392
Strand: Direct
Name: 28210788
Synonym: CTC01087
Alternate gene names: NA
Gene position: 1155935-1157392 (Clockwise)
Preceding gene: 28210787
Following gene: 28210789
Centisome position: 41.29
GC content: 29.97
Gene sequence:
>1458_bases ATGAATATAAAAGAAACATTGCTTAATCTAAATGAAAGAGAAAAAAAGGAAAGAAAAAAAGCACTAAAAGATTTTATATT TTATTTAGGTGAATGTGAAAATATAGATGCTGCGAAATTAAACCAGGATCTATTAGGACAAAATTGGATTACTTTAGATG TTTTAGACTATATACCAAGTCAGATAATAGATAATAAGGTTAAACCACTTATAAACAAACAAGCACGTTTTATGTTTGGT AAGGAACCAGATATACTATTCAAGCCACTAGATAAACAGAACAAAGAAACATGTGAAGAATTAAGGCAGTATATAGATGC AATACTTAATGCTAGTAAGTTTTGGAGTAACACTATGAAAGCTTTTAGGCTTGCAACAGTAACTAAAAGGGTAATGTTAA GATTAGAAGCTAATCCAGGTCAACCTATAAGACTTTATTACCATGATATAAATGACTTTAGTTATGAAGTAGATCCTAAT GATATAACTAAATTGAATAAAGTAATACTAGTAAGACAAGACGCTGAAACCGCAAATAAAGAGGAAAAAGACCAGATATG GTGCAGATACACTTACTATATGAATAAAATAAGTGACAAGGAATCTACTTGTTATTTAAGAATAGAAACTTTTAAAGGTA ATAATCTGGAAGCACCAATAGAAATAAAAGAACAGGACACAGGACTATCTAAAATACCATGTTGGGTAATTTGCAATGAA CAAAGCATTATTAACCCTTATGGACAAAGTGATATAAAAGATTTAAAACCATTGCAAGATAGCTACAATAGGAGACTATC AGATTTTAACGACAGTTTAAGATTTCTTATGTTTGGACAAACAGCTGTAATAGATGCAACAGAAGATACGGTTAATGCTT GTAACATTGCACCTAATTCACTTATGGCTTTAAAAAGTATTGATGATACAGAAGGTAATAAACAAGCTAAAGTACAGCGT GTAGAGAGTAATTTTACTAATGCAGATCCAGTACTTAAATATTTAAAAACATTAGAAGATAGTATGTATGAAAAATTAGG AATACCTAAGCTAGAAAGTCTTCAACAAGTTCCAAGTGCTAAGAGTATTAAATATATGTACACAGAGCTTGTAGCACGTT GTGAGGAAAAATGGCATGATTGGGAACCAATTATAAGGCAAATGATTAGATTAATAGTTGAAGCTTGTGGCAAATTTAAA TGCTATGAAGAGTGGAAAGACGAATGGAATGACTTACTTTATAATATAGTTTTAAATAAAAATTATCCTATTCCAGAAGA TGAAGAAGATAAGAAAAGACTTGCAATGGAAGAAGTAAGAACTAATGTAAGAAGTCATAGAAGTTACATAAAGGACTTTA CAGATGATGAAAATGTAGATGATATTTTAAAAGAAATATGCGAGGATATAACTTCTATTACAGCAGCAGAGCAAGAACAA TTTTTAAGGGAAATATAG
Upstream 100 bases:
>100_bases ATATTGATGTTAAATATGACAAATCAGTTTATAACAAAGGTAGAGGACTTAAACAAAATGTTCTTAAAAAGTATGGAAAG AAAGGAGGTACAGTATTCTA
Downstream 100 bases:
>100_bases TACTAATCTTCCCCTTATATATGGTATAATTTACATGAAGATAAGGGGGAAGAGTTATGGAGTTGGTAATTATATTTTAT ATACTATTTATAATATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNIKETLLNLNEREKKERKKALKDFIFYLGECENIDAAKLNQDLLGQNWITLDVLDYIPSQIIDNKVKPLINKQARFMFG KEPDILFKPLDKQNKETCEELRQYIDAILNASKFWSNTMKAFRLATVTKRVMLRLEANPGQPIRLYYHDINDFSYEVDPN DITKLNKVILVRQDAETANKEEKDQIWCRYTYYMNKISDKESTCYLRIETFKGNNLEAPIEIKEQDTGLSKIPCWVICNE QSIINPYGQSDIKDLKPLQDSYNRRLSDFNDSLRFLMFGQTAVIDATEDTVNACNIAPNSLMALKSIDDTEGNKQAKVQR VESNFTNADPVLKYLKTLEDSMYEKLGIPKLESLQQVPSAKSIKYMYTELVARCEEKWHDWEPIIRQMIRLIVEACGKFK CYEEWKDEWNDLLYNIVLNKNYPIPEDEEDKKRLAMEEVRTNVRSHRSYIKDFTDDENVDDILKEICEDITSITAAEQEQ FLREI
Sequences:
>Translated_485_residues MNIKETLLNLNEREKKERKKALKDFIFYLGECENIDAAKLNQDLLGQNWITLDVLDYIPSQIIDNKVKPLINKQARFMFG KEPDILFKPLDKQNKETCEELRQYIDAILNASKFWSNTMKAFRLATVTKRVMLRLEANPGQPIRLYYHDINDFSYEVDPN DITKLNKVILVRQDAETANKEEKDQIWCRYTYYMNKISDKESTCYLRIETFKGNNLEAPIEIKEQDTGLSKIPCWVICNE QSIINPYGQSDIKDLKPLQDSYNRRLSDFNDSLRFLMFGQTAVIDATEDTVNACNIAPNSLMALKSIDDTEGNKQAKVQR VESNFTNADPVLKYLKTLEDSMYEKLGIPKLESLQQVPSAKSIKYMYTELVARCEEKWHDWEPIIRQMIRLIVEACGKFK CYEEWKDEWNDLLYNIVLNKNYPIPEDEEDKKRLAMEEVRTNVRSHRSYIKDFTDDENVDDILKEICEDITSITAAEQEQ FLREI >Mature_485_residues MNIKETLLNLNEREKKERKKALKDFIFYLGECENIDAAKLNQDLLGQNWITLDVLDYIPSQIIDNKVKPLINKQARFMFG KEPDILFKPLDKQNKETCEELRQYIDAILNASKFWSNTMKAFRLATVTKRVMLRLEANPGQPIRLYYHDINDFSYEVDPN DITKLNKVILVRQDAETANKEEKDQIWCRYTYYMNKISDKESTCYLRIETFKGNNLEAPIEIKEQDTGLSKIPCWVICNE QSIINPYGQSDIKDLKPLQDSYNRRLSDFNDSLRFLMFGQTAVIDATEDTVNACNIAPNSLMALKSIDDTEGNKQAKVQR VESNFTNADPVLKYLKTLEDSMYEKLGIPKLESLQQVPSAKSIKYMYTELVARCEEKWHDWEPIIRQMIRLIVEACGKFK CYEEWKDEWNDLLYNIVLNKNYPIPEDEEDKKRLAMEEVRTNVRSHRSYIKDFTDDENVDDILKEICEDITSITAAEQEQ FLREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56937; Mature: 56937
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKETLLNLNEREKKERKKALKDFIFYLGECENIDAAKLNQDLLGQNWITLDVLDYIPS CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCCEEEHHHHHHHH QIIDNKVKPLINKQARFMFGKEPDILFKPLDKQNKETCEELRQYIDAILNASKFWSNTMK HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFRLATVTKRVMLRLEANPGQPIRLYYHDINDFSYEVDPNDITKLNKVILVRQDAETANK HHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCEEEECCHHHHHHHHEEEEECCCHHCCC EEKDQIWCRYTYYMNKISDKESTCYLRIETFKGNNLEAPIEIKEQDTGLSKIPCWVICNE CCHHCEEEEHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEECC QSIINPYGQSDIKDLKPLQDSYNRRLSDFNDSLRFLMFGQTAVIDATEDTVNACNIAPNS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCHHHHHHCCCCCCH LMALKSIDDTEGNKQAKVQRVESNFTNADPVLKYLKTLEDSMYEKLGIPKLESLQQVPSA HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC KSIKYMYTELVARCEEKWHDWEPIIRQMIRLIVEACGKFKCYEEWKDEWNDLLYNIVLNK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECC NYPIPEDEEDKKRLAMEEVRTNVRSHRSYIKDFTDDENVDDILKEICEDITSITAAEQEQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLREI HHHCC >Mature Secondary Structure MNIKETLLNLNEREKKERKKALKDFIFYLGECENIDAAKLNQDLLGQNWITLDVLDYIPS CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCCEEEHHHHHHHH QIIDNKVKPLINKQARFMFGKEPDILFKPLDKQNKETCEELRQYIDAILNASKFWSNTMK HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFRLATVTKRVMLRLEANPGQPIRLYYHDINDFSYEVDPNDITKLNKVILVRQDAETANK HHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCEEEECCHHHHHHHHEEEEECCCHHCCC EEKDQIWCRYTYYMNKISDKESTCYLRIETFKGNNLEAPIEIKEQDTGLSKIPCWVICNE CCHHCEEEEHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEECC QSIINPYGQSDIKDLKPLQDSYNRRLSDFNDSLRFLMFGQTAVIDATEDTVNACNIAPNS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCHHHHHHCCCCCCH LMALKSIDDTEGNKQAKVQRVESNFTNADPVLKYLKTLEDSMYEKLGIPKLESLQQVPSA HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC KSIKYMYTELVARCEEKWHDWEPIIRQMIRLIVEACGKFKCYEEWKDEWNDLLYNIVLNK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECC NYPIPEDEEDKKRLAMEEVRTNVRSHRSYIKDFTDDENVDDILKEICEDITSITAAEQEQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLREI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA