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The map label for this gene is xtmA [H]

Identifier: 28210786

GI number: 28210786

Start: 1153679

End: 1154602

Strand: Direct

Name: xtmA [H]

Synonym: CTC01085

Alternate gene names: 28210786

Gene position: 1153679-1154602 (Clockwise)

Preceding gene: 28210785

Following gene: 28210787

Centisome position: 41.21

GC content: 30.19

Gene sequence:

>924_bases
ATGGCTAAAACAAGGAGTCCCGATTGGGAAAATATAAAGAAGGAATACATAGAATTAAATGGCGATGTAAAGTTAAAAGA
ATTTGCAGAGGAACATGGAATTAAATATTCTACTCTAAGAAGTAGAAAAAATAGAGAGAATTGGGATAGTGAAATAAATA
AAGATGTTGCAACAAAGAGTGCAACGCAACAAAAGAATGTTGCAACAGAAAATAAGACTAAGAATAATGATAAGGAGCCT
ATTGATAAGGAAGTAAAAGAGGTATTAGAAAATACTGAACTTACTGATAAGCAAAGGCTCTTTTGTATTTACTATGTTAA
AAGCTTTAATCAGACGATGGCAGCTATAAAAGCAGGATATTCGCAAGAAAGAGCTCATGTAACAGGAAGTGAATTAGTAA
GAAATAGTAAGGTAAAAGCCTATATTAAAGAGCTTAAAGGGAAAATGATAGGAGAAATATTTATAGATGCTATGGATGTA
TTAAATAAGTATATAAAGATAGCATTTGCAGATATAACTGATTACCTAACATTTGGACAACGAGAAGTACCTGTTATGGG
ACCATTTGGACCTATAGTTGATAAAAAGACTAAAAAGGAAATCACTAAAATAATTAACTATGTAGACTTTAAAGAAAGTA
ATGTAGTAGATGGAACAATAATAAGTGAAGTAAAACAAGGCAAAGATGGAGTATCTATTAAATTTGAGGATAGAATGAAG
GCTTTAGATAAACTATCTCAATACTTTGATTTATTCCCAGATAACTTTAAAAGAAAGATAGAAGAAGAAAGATCCAAACA
AGCTAGAGAAAAACTAGAATTAGAGAAATCTAAAGTAACAGGTAATGATGATGAAGTTCAAGATGATGGATTTATTGAAG
CATTAGAAGGTAAAGTAGAGGAAGTATGGAAAGATGAAAAATAA

Upstream 100 bases:

>100_bases
GGAGATAAATGAGGAACATATAAGAAAGAAGTTATTAAAAGAGCTTAATATATAGGCTCTTTTTTATTTATGGAAAAGCA
GAGGTGGTGACAATGTAGAT

Downstream 100 bases:

>100_bases
AGTTGTACCTTTTAAGTTTAAACCTTTCTCTAATAAACAATTAAAAGTTTTAACATGGTGGATGAAAGACTCACCAGTAG
CTAATAAAGATATACTTATT

Product: phage terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAKTRSPDWENIKKEYIELNGDVKLKEFAEEHGIKYSTLRSRKNRENWDSEINKDVATKSATQQKNVATENKTKNNDKEP
IDKEVKEVLENTELTDKQRLFCIYYVKSFNQTMAAIKAGYSQERAHVTGSELVRNSKVKAYIKELKGKMIGEIFIDAMDV
LNKYIKIAFADITDYLTFGQREVPVMGPFGPIVDKKTKKEITKIINYVDFKESNVVDGTIISEVKQGKDGVSIKFEDRMK
ALDKLSQYFDLFPDNFKRKIEEERSKQAREKLELEKSKVTGNDDEVQDDGFIEALEGKVEEVWKDEK

Sequences:

>Translated_307_residues
MAKTRSPDWENIKKEYIELNGDVKLKEFAEEHGIKYSTLRSRKNRENWDSEINKDVATKSATQQKNVATENKTKNNDKEP
IDKEVKEVLENTELTDKQRLFCIYYVKSFNQTMAAIKAGYSQERAHVTGSELVRNSKVKAYIKELKGKMIGEIFIDAMDV
LNKYIKIAFADITDYLTFGQREVPVMGPFGPIVDKKTKKEITKIINYVDFKESNVVDGTIISEVKQGKDGVSIKFEDRMK
ALDKLSQYFDLFPDNFKRKIEEERSKQAREKLELEKSKVTGNDDEVQDDGFIEALEGKVEEVWKDEK
>Mature_306_residues
AKTRSPDWENIKKEYIELNGDVKLKEFAEEHGIKYSTLRSRKNRENWDSEINKDVATKSATQQKNVATENKTKNNDKEPI
DKEVKEVLENTELTDKQRLFCIYYVKSFNQTMAAIKAGYSQERAHVTGSELVRNSKVKAYIKELKGKMIGEIFIDAMDVL
NKYIKIAFADITDYLTFGQREVPVMGPFGPIVDKKTKKEITKIINYVDFKESNVVDGTIISEVKQGKDGVSIKFEDRMKA
LDKLSQYFDLFPDNFKRKIEEERSKQAREKLELEKSKVTGNDDEVQDDGFIEALEGKVEEVWKDEK

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 35525; Mature: 35393

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTRSPDWENIKKEYIELNGDVKLKEFAEEHGIKYSTLRSRKNRENWDSEINKDVATKS
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
ATQQKNVATENKTKNNDKEPIDKEVKEVLENTELTDKQRLFCIYYVKSFNQTMAAIKAGY
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHCC
SQERAHVTGSELVRNSKVKAYIKELKGKMIGEIFIDAMDVLNKYIKIAFADITDYLTFGQ
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REVPVMGPFGPIVDKKTKKEITKIINYVDFKESNVVDGTIISEVKQGKDGVSIKFEDRMK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHH
ALDKLSQYFDLFPDNFKRKIEEERSKQAREKLELEKSKVTGNDDEVQDDGFIEALEGKVE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
EVWKDEK
HHCCCCC
>Mature Secondary Structure 
AKTRSPDWENIKKEYIELNGDVKLKEFAEEHGIKYSTLRSRKNRENWDSEINKDVATKS
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH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HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]