| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210785
Identifier: 28210785
GI number: 28210785
Start: 1152545
End: 1153633
Strand: Direct
Name: 28210785
Synonym: CTC01084
Alternate gene names: NA
Gene position: 1152545-1153633 (Clockwise)
Preceding gene: 28210784
Following gene: 28210786
Centisome position: 41.17
GC content: 26.35
Gene sequence:
>1089_bases ATGATACTAAAAGAAAACTTATTATATCCATTAGTACATTATACAGATATGTATGGCAATTTCATAGGATTTCAGAAAGA TAAAAATTCACAAGTAGTTTTATGTTCATGTATGAGAAAAGCAGTAGAAAACTGTATAAAACTATTTTTAAAATATCCTT CAAGTTTGCTTAATCCTCCAGAGTGGATATTGTTAAAACAACTGGATATGCCAGAAAGTATAAATGATGTCATAAGAAAG AAAAATCCACCAGTAGGGCTAGAATGGCTAAATTATATTAAATTTAAAAAGGATGTATGCCATAGATGTAATATAGAAAA ACCTAATAAAGAATATTGTACTCCTATGTATGGAACTAAATTTAAAAGAACCTTTGGATGGTATATAAATATAAATTACT TTAATAAGGGAATAAACCCCAGTACACATGATGGAATATATTATTTAAAAGAAGATGGTCCTATTGAAATTAGATTAATA TTAGATCCAACAGATAAAGATTTACTTGAAGATATAAGAAGATATAAACTACTAGATACATTTGAAGGCAAAGAAATATT GGATATGCTTAAAAAGATAGAGCATAGAGAAGAAGCAATATTATTAAGATATTTTCATATAGAAGATAAAGAGTTACAAT ATCAAAAATTATATTATGCAATTGAGTATGTAATGAAACAAAGGTTAAAGGAAGTACATAAAGTAATTGAAAATGAAGTA AGAGACTGGTTTAAATCTAAAAGAGTTGGTGAGAAATGGGAGAATGAAACTAACTTATATAAGATAATAAGAAAACTATA TCCAGAGTTAACTATGTATAGACATTTTAGGCCACCATTTTTAGATGGACTAGAATTAGATATTTATATAGAAACTTTAG ATATAGGGATAGAATATCAAGGAGAACAACACTTCAAACCCTTTGAACATTGGGGAGGAGAAGAAGCTTTTGAGAAAAGA CAAGAATTAGATAAAAAGAAAAGGGAATTATGCAATAAAAATAATATAAAACTCATTTATTTTAATTATGATGAGGAGAT AAATGAGGAACATATAAGAAAGAAGTTATTAAAAGAGCTTAATATATAG
Upstream 100 bases:
>100_bases ATATATCTATTAAATTGAATGTTTTTTATATAACAACAATTGTAATTATGGTAGAAGGAATTAAGTAAGCTATATAGAAT GACTTTATTAGGTGATATAA
Downstream 100 bases:
>100_bases GCTCTTTTTTATTTATGGAAAAGCAGAGGTGGTGACAATGTAGATATGGCTAAAACAAGGAGTCCCGATTGGGAAAATAT AAAGAAGGAATACATAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MILKENLLYPLVHYTDMYGNFIGFQKDKNSQVVLCSCMRKAVENCIKLFLKYPSSLLNPPEWILLKQLDMPESINDVIRK KNPPVGLEWLNYIKFKKDVCHRCNIEKPNKEYCTPMYGTKFKRTFGWYININYFNKGINPSTHDGIYYLKEDGPIEIRLI LDPTDKDLLEDIRRYKLLDTFEGKEILDMLKKIEHREEAILLRYFHIEDKELQYQKLYYAIEYVMKQRLKEVHKVIENEV RDWFKSKRVGEKWENETNLYKIIRKLYPELTMYRHFRPPFLDGLELDIYIETLDIGIEYQGEQHFKPFEHWGGEEAFEKR QELDKKKRELCNKNNIKLIYFNYDEEINEEHIRKKLLKELNI
Sequences:
>Translated_362_residues MILKENLLYPLVHYTDMYGNFIGFQKDKNSQVVLCSCMRKAVENCIKLFLKYPSSLLNPPEWILLKQLDMPESINDVIRK KNPPVGLEWLNYIKFKKDVCHRCNIEKPNKEYCTPMYGTKFKRTFGWYININYFNKGINPSTHDGIYYLKEDGPIEIRLI LDPTDKDLLEDIRRYKLLDTFEGKEILDMLKKIEHREEAILLRYFHIEDKELQYQKLYYAIEYVMKQRLKEVHKVIENEV RDWFKSKRVGEKWENETNLYKIIRKLYPELTMYRHFRPPFLDGLELDIYIETLDIGIEYQGEQHFKPFEHWGGEEAFEKR QELDKKKRELCNKNNIKLIYFNYDEEINEEHIRKKLLKELNI >Mature_362_residues MILKENLLYPLVHYTDMYGNFIGFQKDKNSQVVLCSCMRKAVENCIKLFLKYPSSLLNPPEWILLKQLDMPESINDVIRK KNPPVGLEWLNYIKFKKDVCHRCNIEKPNKEYCTPMYGTKFKRTFGWYININYFNKGINPSTHDGIYYLKEDGPIEIRLI LDPTDKDLLEDIRRYKLLDTFEGKEILDMLKKIEHREEAILLRYFHIEDKELQYQKLYYAIEYVMKQRLKEVHKVIENEV RDWFKSKRVGEKWENETNLYKIIRKLYPELTMYRHFRPPFLDGLELDIYIETLDIGIEYQGEQHFKPFEHWGGEEAFEKR QELDKKKRELCNKNNIKLIYFNYDEEINEEHIRKKLLKELNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43995; Mature: 43995
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKENLLYPLVHYTDMYGNFIGFQKDKNSQVVLCSCMRKAVENCIKLFLKYPSSLLNPP CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHCCCC EWILLKQLDMPESINDVIRKKNPPVGLEWLNYIKFKKDVCHRCNIEKPNKEYCTPMYGTK CEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC FKRTFGWYININYFNKGINPSTHDGIYYLKEDGPIEIRLILDPTDKDLLEDIRRYKLLDT HHEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHC FEGKEILDMLKKIEHREEAILLRYFHIEDKELQYQKLYYAIEYVMKQRLKEVHKVIENEV CCCHHHHHHHHHHHHHHHEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDWFKSKRVGEKWENETNLYKIIRKLYPELTMYRHFRPPFLDGLELDIYIETLDIGIEYQ HHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECEEEC GEQHFKPFEHWGGEEAFEKRQELDKKKRELCNKNNIKLIYFNYDEEINEEHIRKKLLKEL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC NI CC >Mature Secondary Structure MILKENLLYPLVHYTDMYGNFIGFQKDKNSQVVLCSCMRKAVENCIKLFLKYPSSLLNPP CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHCCCC EWILLKQLDMPESINDVIRKKNPPVGLEWLNYIKFKKDVCHRCNIEKPNKEYCTPMYGTK CEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC FKRTFGWYININYFNKGINPSTHDGIYYLKEDGPIEIRLILDPTDKDLLEDIRRYKLLDT HHEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHC FEGKEILDMLKKIEHREEAILLRYFHIEDKELQYQKLYYAIEYVMKQRLKEVHKVIENEV CCCHHHHHHHHHHHHHHHEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDWFKSKRVGEKWENETNLYKIIRKLYPELTMYRHFRPPFLDGLELDIYIETLDIGIEYQ HHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECEEEC GEQHFKPFEHWGGEEAFEKRQELDKKKRELCNKNNIKLIYFNYDEEINEEHIRKKLLKEL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC NI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA