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The map label for this gene is yrrO [H]

Identifier: 28210765

GI number: 28210765

Start: 1133919

End: 1135136

Strand: Direct

Name: yrrO [H]

Synonym: CTC01063

Alternate gene names: 28210765

Gene position: 1133919-1135136 (Clockwise)

Preceding gene: 28210764

Following gene: 28210766

Centisome position: 40.51

GC content: 31.36

Gene sequence:

>1218_bases
ATGAATAAACCTGAAATATTAGCACCAGCAGGCAATTTAGAAAAGCTAAAAACAGCTATATTATTTGGTGCAGATGCAGT
TTATTTAGGTGGAAGCAAGTTAAATCTAAGAGCTTTTGCTGATAATTTTACCGATGAAGAGCTAATTGAAGGAATAGAGT
TTGCTCATAGTAGAGGAAAAAGGGTATATGTAACAGTTAATGTTTTTCCTCACAATGAGGATTTAGAAGGGTTAGAACCC
TATTTAAAGGATTTGGAAAACATGAAAGTAGATGCCATTATAGTATCAGACCCTGGAATAATAATGACAGCTAGGGAAGT
GGCACCTAAGCTAGAAATTCATTTAAGCACTCAAGCTAATAATGTTAACTGGAAATCAGCTATATTTTGGCATAAACAAG
GGGTTAAAAGAATTGTTTTAGCAAGAGAATTATCCTTTGAAGAAATAAAAGGAATAAGAGAAAAATTGCCAGAAGATTGT
GAGTTAGAAGCTTTTGTACATGGATCTATGTGTATGTCCTACTCAGGAAGATGCCTTCTTTCCAACTATATGACTGGAAG
AGATGCTAATAGAGGAGAATGTGCTCAACCATGTAGATATAAATATTATTTAATGGAAGAAAAGAGAGAAGGACAATACT
TCCCAGTATTTCAAGATGAGAGAGGGACTTACATATTAAATTCTAAAGATTTATGTATGATAAAACATATACCTGAGTTG
GTTAGATGTGGAATAAATTCTTTTAAAATTGAAGGAAGAATGAAAAGTTCTTATTATGTAGCTTCAGTAGTAAAATCCTA
TAGACAGGCATTAGATGCCTATATAGAGGATACTAAAAATTATAAATTCAATGAAGATTGGATGAATAATTTATTGAAAA
CAAGCCACAGAGATTATTATACTGGTTTTTATCTTGGAGATAAAGATAGTCAAATATATGAAACTTCATCATATATAAGA
AACTATGATATAGTTGGAATAGTTAGAGACTATAATAAGGAAACCAATGAAGCAACTATAGAACAGAGAAATAAATTGTT
TGAAGGAGATTCAGTGGAGGTTCTAAGACCTGTTGGAGATAGCTTCCAAGTAAAGCTTGAAAACATTCGTAATGAAAAAG
GTGAAAAAATAGAATCAACTCCTGTAGCTCAAATGATATATAAAGCTAGGGTTAACATAGAATTAAAGAAAAATGATATG
CTTATTAAAGCTAAGTAA

Upstream 100 bases:

>100_bases
TGAGAAAATTTTTGGATATGGTATCACAAGAGGAGTTCTTAACATCTATTATACCTATGGGAGATGGTTTAGCATTGATT
ACAAGGAGGAATAAATAGCC

Downstream 100 bases:

>100_bases
AGTTTATTTGAGGGGGGTAGAAGATTTACTATGAGTAAAAGACCGATATTAATAGGTATAACTGGTGGAACGGGCTCAGG
AAAGAGCACTGTAAGTAAAG

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNKPEILAPAGNLEKLKTAILFGADAVYLGGSKLNLRAFADNFTDEELIEGIEFAHSRGKRVYVTVNVFPHNEDLEGLEP
YLKDLENMKVDAIIVSDPGIIMTAREVAPKLEIHLSTQANNVNWKSAIFWHKQGVKRIVLARELSFEEIKGIREKLPEDC
ELEAFVHGSMCMSYSGRCLLSNYMTGRDANRGECAQPCRYKYYLMEEKREGQYFPVFQDERGTYILNSKDLCMIKHIPEL
VRCGINSFKIEGRMKSSYYVASVVKSYRQALDAYIEDTKNYKFNEDWMNNLLKTSHRDYYTGFYLGDKDSQIYETSSYIR
NYDIVGIVRDYNKETNEATIEQRNKLFEGDSVEVLRPVGDSFQVKLENIRNEKGEKIESTPVAQMIYKARVNIELKKNDM
LIKAK

Sequences:

>Translated_405_residues
MNKPEILAPAGNLEKLKTAILFGADAVYLGGSKLNLRAFADNFTDEELIEGIEFAHSRGKRVYVTVNVFPHNEDLEGLEP
YLKDLENMKVDAIIVSDPGIIMTAREVAPKLEIHLSTQANNVNWKSAIFWHKQGVKRIVLARELSFEEIKGIREKLPEDC
ELEAFVHGSMCMSYSGRCLLSNYMTGRDANRGECAQPCRYKYYLMEEKREGQYFPVFQDERGTYILNSKDLCMIKHIPEL
VRCGINSFKIEGRMKSSYYVASVVKSYRQALDAYIEDTKNYKFNEDWMNNLLKTSHRDYYTGFYLGDKDSQIYETSSYIR
NYDIVGIVRDYNKETNEATIEQRNKLFEGDSVEVLRPVGDSFQVKLENIRNEKGEKIESTPVAQMIYKARVNIELKKNDM
LIKAK
>Mature_405_residues
MNKPEILAPAGNLEKLKTAILFGADAVYLGGSKLNLRAFADNFTDEELIEGIEFAHSRGKRVYVTVNVFPHNEDLEGLEP
YLKDLENMKVDAIIVSDPGIIMTAREVAPKLEIHLSTQANNVNWKSAIFWHKQGVKRIVLARELSFEEIKGIREKLPEDC
ELEAFVHGSMCMSYSGRCLLSNYMTGRDANRGECAQPCRYKYYLMEEKREGQYFPVFQDERGTYILNSKDLCMIKHIPEL
VRCGINSFKIEGRMKSSYYVASVVKSYRQALDAYIEDTKNYKFNEDWMNNLLKTSHRDYYTGFYLGDKDSQIYETSSYIR
NYDIVGIVRDYNKETNEATIEQRNKLFEGDSVEVLRPVGDSFQVKLENIRNEKGEKIESTPVAQMIYKARVNIELKKNDM
LIKAK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=424, Percent_Identity=39.622641509434, Blast_Score=282, Evalue=2e-77,
Organism=Escherichia coli, GI87081910, Length=312, Percent_Identity=36.5384615384615, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789548, Length=313, Percent_Identity=32.9073482428115, Blast_Score=164, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46713; Mature: 46713

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPEILAPAGNLEKLKTAILFGADAVYLGGSKLNLRAFADNFTDEELIEGIEFAHSRGK
CCCCCEECCCCCHHHHHHHHEECCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
RVYVTVNVFPHNEDLEGLEPYLKDLENMKVDAIIVSDPGIIMTAREVAPKLEIHLSTQAN
EEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCEEEEHHHCCCEEEEEEEECCC
NVNWKSAIFWHKQGVKRIVLARELSFEEIKGIREKLPEDCELEAFVHGSMCMSYSGRCLL
CCCCHHEEEEEHHCHHHEEHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEE
SNYMTGRDANRGECAQPCRYKYYLMEEKREGQYFPVFQDERGTYILNSKDLCMIKHIPEL
ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHH
VRCGINSFKIEGRMKSSYYVASVVKSYRQALDAYIEDTKNYKFNEDWMNNLLKTSHRDYY
HHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEE
TGFYLGDKDSQIYETSSYIRNYDIVGIVRDYNKETNEATIEQRNKLFEGDSVEVLRPVGD
EEEEECCCCCCEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCC
SFQVKLENIRNEKGEKIESTPVAQMIYKARVNIELKKNDMLIKAK
CEEEEEHHHCCCCCCCCCCCHHHHHHHHHHEEEEEECCCEEEEEC
>Mature Secondary Structure
MNKPEILAPAGNLEKLKTAILFGADAVYLGGSKLNLRAFADNFTDEELIEGIEFAHSRGK
CCCCCEECCCCCHHHHHHHHEECCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
RVYVTVNVFPHNEDLEGLEPYLKDLENMKVDAIIVSDPGIIMTAREVAPKLEIHLSTQAN
EEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCEEEEHHHCCCEEEEEEEECCC
NVNWKSAIFWHKQGVKRIVLARELSFEEIKGIREKLPEDCELEAFVHGSMCMSYSGRCLL
CCCCHHEEEEEHHCHHHEEHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEE
SNYMTGRDANRGECAQPCRYKYYLMEEKREGQYFPVFQDERGTYILNSKDLCMIKHIPEL
ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHH
VRCGINSFKIEGRMKSSYYVASVVKSYRQALDAYIEDTKNYKFNEDWMNNLLKTSHRDYY
HHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEE
TGFYLGDKDSQIYETSSYIRNYDIVGIVRDYNKETNEATIEQRNKLFEGDSVEVLRPVGD
EEEEECCCCCCEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCC
SFQVKLENIRNEKGEKIESTPVAQMIYKARVNIELKKNDMLIKAK
CEEEEEHHHCCCCCCCCCCCHHHHHHHHHHEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]