| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210708
Identifier: 28210708
GI number: 28210708
Start: 1073192
End: 1073596
Strand: Direct
Name: 28210708
Synonym: CTC01002
Alternate gene names: NA
Gene position: 1073192-1073596 (Clockwise)
Preceding gene: 28210707
Following gene: 28210709
Centisome position: 38.34
GC content: 28.4
Gene sequence:
>405_bases ATGAAAGAGAATAGAATAAAAGCTTGTATGATAGGGGAAAGCATATTTAAAGTAGGTGATTATACTTCACTAGCACAAGG GTGGGGAATATATAAAGGTGCAATATCTTTAGAAGAATGTGTTAACTTTAAAATAAAGGACATGTACTTTGAAGAGTTTG AAGATGGACAACTACCAAGATTTATAGCAGTAGTAGAAACTAATAAAAATAAAACTGTAAATGTTAATATAGAAGATTTA AAAGATATAAGATGTAATGTTGAAAATAGAAAAGAATTAGAGAGAATAGGTTATGATTTTCAAAAAGGAGCTATATATTG TAAGGGATATGAAGATTTAAATGGACATTGGAAATTCTTTAACATAGGATTACAGGGACTAGAAAAAACCTTATGTATGG CTTAG
Upstream 100 bases:
>100_bases TTCAGAAAAATTTAAAAAAAACATATTGACAAAGTTTTAACAAGTATGATAAAATATAAACAAGTTAAAAGAGGATATAA AAAAGAGGAGGGGTCTAGTT
Downstream 100 bases:
>100_bases TATATGAAAATAAAGATATATATTTAAAATTTGGAATATTCATTAGGATGAATGATGTTCCAAATTTTATTTTTTGTTTA CAAAAAGAATAAGTAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA
Sequences:
>Translated_134_residues MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA >Mature_134_residues MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15511; Mature: 15511
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPR CCCCCEEEEEECHHHHHCCCCHHHHHCCCEEECCEEHHHHCCCEEEEHHHHHCCCCCCCE FIAVVETNKNKTVNVNIEDLKDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFF EEEEEECCCCCEEEEEHHHCHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE NIGLQGLEKTLCMA EECHHHHHHHHCCC >Mature Secondary Structure MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPR CCCCCEEEEEECHHHHHCCCCHHHHHCCCEEECCEEHHHHCCCEEEEHHHHHCCCCCCCE FIAVVETNKNKTVNVNIEDLKDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFF EEEEEECCCCCEEEEEHHHCHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE NIGLQGLEKTLCMA EECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA