| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210698
Identifier: 28210698
GI number: 28210698
Start: 1062642
End: 1064372
Strand: Direct
Name: 28210698
Synonym: CTC00992
Alternate gene names: NA
Gene position: 1062642-1064372 (Clockwise)
Preceding gene: 28210697
Following gene: 28210699
Centisome position: 37.96
GC content: 23.92
Gene sequence:
>1731_bases ATGAAAGTTATATTAGTTGCAATAAATTCGAAATTTATACATAGTAACTTAGCAGTAAGATACTTAAAAAGATTTACAGA AGATTTACAATACACATGTGGTATAGAGGAGTTTTCTATAAATGATAGGGTAGAAAGAATTGTAGAAGAAATTATTTTAA AGGAACCAGAGGTTGTGGCTTTTTCTTGTTATATATGGAACATATCCTACATAAAAAAAGTATCAAGACTTATTAAGTTA ATAAATCCTAATATTAAAATAATACTGGGTGGACCAGAAGTTTCTTTTGATGCCAGAGATTATTTAAAAGAAGAATACTG TGATTTTTTAATAGAGGGAGAAGGTGAAGAGACTTATAGAGAACTTATAGCTTATCTATTAGAAAAAAATAAAGAAAAAG AACATATAAATAATATAAAAGCTTTGTATTATATTGAGGATAACGAAATAATATATACAGGAAAAAGAGATTTAATGGAT ATGAATGATATTGTATTTCCTTATGAAGAACTAGAGGAATTAAATAATAAAATAATTTATTATGAAGCATCCAGAGGATG TCCTTTTAATTGTAAATACTGCTTATCTTCAACTGTTCATGGATTAAGATTTTTAAATATAAATAGAGTAAAAAAAGAAT TACAATTTTTTATAGATAAAAAAGTAAAGTTAGTGAAATTTGTTGACAGAACTTTTAATTGTGACCATGAATTTGCATAT GAAATATGGAAATTCATAATAGAGAAAAGTCCTGAAAATATAACTTTTCATTTTGAAATTTCAGCGGATCTTTTAACTGA AAAAGAAATAAATCTTTTGTCAAAGGCAAAAGAAGGGTTAATACAATTTGAAGTAGGAGTACAAAGTACTAATAAAGAAG TGTTAAAAAATATAAATAGAGATGCTGATTTTTTAGAAATAAAAGAAAAAGTAGAAGAACTTTTAAAAATTAAAAATATA AATCAACATTTAGATTTAATAGCAGGACTTCCAGGAGAAGATTATAATTCTTTTAAAAACTCTTTTAATGATTTATATAG TATAGAGCCAAATGAAATACAATTAGGTTTTTTAAAACTCTTAAAAGGCTCATCTATGAGGGAAGAAGCAGATAAATGGG GAATGATATATTCACCTTATACTCCTTATGAAATTTTAAAAACAAATAACATTAGTTACGAAGAAATATTAAAACTTAAA AGAGTTGAAGAAGTTTTAGATAAATATTACAATTCTGGGCAATTTAATAATATATTAAAATATTTTATTAAAAAATTTCA AACACCTTTTGAATTTTATGAAAAATTAAGTGAATACTTCTATAGTAGAGGATATTTTTCTAGAAGTATATCTTCTGTTA GTTATTACAAGGCTTTCCTTGACTTTAGTGAGGAAATATTAAAAGAAAAATCATACATTTTAGAAGAAATAATAAAGTAT GATTATTTAAAATTTAACAAGAAAAAATGGTTACCCGAATTTTTAGAAAGACATATGGATAAAAAAGAAGAGAGACAGAT AAAGATGATACTAAAAGAACAGGGAATTGTAGATAAATCAGAGAATATAAATAATTACCACATTGAAAAATTTAAAATAG ATGTACTAAAATACGAAGAAATATCTACGCTCGAAAAAGGATGGGTTTTCATATTATTTGACGATAATAATAGAAAATCG GTTAAAAATATAACAACAATTGTAAAAAGATACATTATTGAGTATAATTAA
Upstream 100 bases:
>100_bases TGAAAATACTTGAAAAATATTATGATATACTAGACATAAAAAATGAATTTGGAATATATTTTATAAAAGCTAGAAATTCT AAGTAGAAAGGAAGACATAA
Downstream 100 bases:
>100_bases ATTTAATAACTCTCATCTTTTACGTTGCTAATTAACATAGCAATAAAAATCCTTGAAAACTTTATGCTAATAATATTATA ATAAATAGTATCTATTAATG
Product: magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MKVILVAINSKFIHSNLAVRYLKRFTEDLQYTCGIEEFSINDRVERIVEEIILKEPEVVAFSCYIWNISYIKKVSRLIKL INPNIKIILGGPEVSFDARDYLKEEYCDFLIEGEGEETYRELIAYLLEKNKEKEHINNIKALYYIEDNEIIYTGKRDLMD MNDIVFPYEELEELNNKIIYYEASRGCPFNCKYCLSSTVHGLRFLNINRVKKELQFFIDKKVKLVKFVDRTFNCDHEFAY EIWKFIIEKSPENITFHFEISADLLTEKEINLLSKAKEGLIQFEVGVQSTNKEVLKNINRDADFLEIKEKVEELLKIKNI NQHLDLIAGLPGEDYNSFKNSFNDLYSIEPNEIQLGFLKLLKGSSMREEADKWGMIYSPYTPYEILKTNNISYEEILKLK RVEEVLDKYYNSGQFNNILKYFIKKFQTPFEFYEKLSEYFYSRGYFSRSISSVSYYKAFLDFSEEILKEKSYILEEIIKY DYLKFNKKKWLPEFLERHMDKKEERQIKMILKEQGIVDKSENINNYHIEKFKIDVLKYEEISTLEKGWVFILFDDNNRKS VKNITTIVKRYIIEYN
Sequences:
>Translated_576_residues MKVILVAINSKFIHSNLAVRYLKRFTEDLQYTCGIEEFSINDRVERIVEEIILKEPEVVAFSCYIWNISYIKKVSRLIKL INPNIKIILGGPEVSFDARDYLKEEYCDFLIEGEGEETYRELIAYLLEKNKEKEHINNIKALYYIEDNEIIYTGKRDLMD MNDIVFPYEELEELNNKIIYYEASRGCPFNCKYCLSSTVHGLRFLNINRVKKELQFFIDKKVKLVKFVDRTFNCDHEFAY EIWKFIIEKSPENITFHFEISADLLTEKEINLLSKAKEGLIQFEVGVQSTNKEVLKNINRDADFLEIKEKVEELLKIKNI NQHLDLIAGLPGEDYNSFKNSFNDLYSIEPNEIQLGFLKLLKGSSMREEADKWGMIYSPYTPYEILKTNNISYEEILKLK RVEEVLDKYYNSGQFNNILKYFIKKFQTPFEFYEKLSEYFYSRGYFSRSISSVSYYKAFLDFSEEILKEKSYILEEIIKY DYLKFNKKKWLPEFLERHMDKKEERQIKMILKEQGIVDKSENINNYHIEKFKIDVLKYEEISTLEKGWVFILFDDNNRKS VKNITTIVKRYIIEYN >Mature_576_residues MKVILVAINSKFIHSNLAVRYLKRFTEDLQYTCGIEEFSINDRVERIVEEIILKEPEVVAFSCYIWNISYIKKVSRLIKL INPNIKIILGGPEVSFDARDYLKEEYCDFLIEGEGEETYRELIAYLLEKNKEKEHINNIKALYYIEDNEIIYTGKRDLMD MNDIVFPYEELEELNNKIIYYEASRGCPFNCKYCLSSTVHGLRFLNINRVKKELQFFIDKKVKLVKFVDRTFNCDHEFAY EIWKFIIEKSPENITFHFEISADLLTEKEINLLSKAKEGLIQFEVGVQSTNKEVLKNINRDADFLEIKEKVEELLKIKNI NQHLDLIAGLPGEDYNSFKNSFNDLYSIEPNEIQLGFLKLLKGSSMREEADKWGMIYSPYTPYEILKTNNISYEEILKLK RVEEVLDKYYNSGQFNNILKYFIKKFQTPFEFYEKLSEYFYSRGYFSRSISSVSYYKAFLDFSEEILKEKSYILEEIIKY DYLKFNKKKWLPEFLERHMDKKEERQIKMILKEQGIVDKSENINNYHIEKFKIDVLKYEEISTLEKGWVFILFDDNNRKS VKNITTIVKRYIIEYN
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 68880; Mature: 68880
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVILVAINSKFIHSNLAVRYLKRFTEDLQYTCGIEEFSINDRVERIVEEIILKEPEVVA CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE FSCYIWNISYIKKVSRLIKLINPNIKIILGGPEVSFDARDYLKEEYCDFLIEGEGEETYR EEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCEEEECCCHHHHH ELIAYLLEKNKEKEHINNIKALYYIEDNEIIYTGKRDLMDMNDIVFPYEELEELNNKIIY HHHHHHHHCCCCHHHHCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEE YEASRGCPFNCKYCLSSTVHGLRFLNINRVKKELQFFIDKKVKLVKFVDRTFNCDHEFAY EECCCCCCCCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EIWKFIIEKSPENITFHFEISADLLTEKEINLLSKAKEGLIQFEVGVQSTNKEVLKNINR HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCC DADFLEIKEKVEELLKIKNINQHLDLIAGLPGEDYNSFKNSFNDLYSIEPNEIQLGFLKL CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LKGSSMREEADKWGMIYSPYTPYEILKTNNISYEEILKLKRVEEVLDKYYNSGQFNNILK HCCCCHHHHHHHCCEEECCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH YFIKKFQTPFEFYEKLSEYFYSRGYFSRSISSVSYYKAFLDFSEEILKEKSYILEEIIKY HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYLKFNKKKWLPEFLERHMDKKEERQIKMILKEQGIVDKSENINNYHIEKFKIDVLKYEE HHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEHHH ISTLEKGWVFILFDDNNRKSVKNITTIVKRYIIEYN HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVILVAINSKFIHSNLAVRYLKRFTEDLQYTCGIEEFSINDRVERIVEEIILKEPEVVA CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE FSCYIWNISYIKKVSRLIKLINPNIKIILGGPEVSFDARDYLKEEYCDFLIEGEGEETYR EEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCEEEECCCHHHHH ELIAYLLEKNKEKEHINNIKALYYIEDNEIIYTGKRDLMDMNDIVFPYEELEELNNKIIY HHHHHHHHCCCCHHHHCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHCCEEEE YEASRGCPFNCKYCLSSTVHGLRFLNINRVKKELQFFIDKKVKLVKFVDRTFNCDHEFAY EECCCCCCCCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EIWKFIIEKSPENITFHFEISADLLTEKEINLLSKAKEGLIQFEVGVQSTNKEVLKNINR HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCC DADFLEIKEKVEELLKIKNINQHLDLIAGLPGEDYNSFKNSFNDLYSIEPNEIQLGFLKL CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LKGSSMREEADKWGMIYSPYTPYEILKTNNISYEEILKLKRVEEVLDKYYNSGQFNNILK HCCCCHHHHHHHCCEEECCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH YFIKKFQTPFEFYEKLSEYFYSRGYFSRSISSVSYYKAFLDFSEEILKEKSYILEEIIKY HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYLKFNKKKWLPEFLERHMDKKEERQIKMILKEQGIVDKSENINNYHIEKFKIDVLKYEE HHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEHHH ISTLEKGWVFILFDDNNRKSVKNITTIVKRYIIEYN HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]