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The map label for this gene is merR [H]

Identifier: 28210659

GI number: 28210659

Start: 1012044

End: 1012898

Strand: Direct

Name: merR [H]

Synonym: CTC00948

Alternate gene names: 28210659

Gene position: 1012044-1012898 (Clockwise)

Preceding gene: 28210658

Following gene: 28210662

Centisome position: 36.15

GC content: 30.53

Gene sequence:

>855_bases
ATGAGCTCGAAAACATACATGTATGGAGGTGAATATATGCTTAAAATAGGTGATTTTTCAAAATTATCAAGAATCAGTAT
ACGTATGCTCCGTCATTATAACGATATTGGGCTACTTATTCCAGAGGATATTGATGAGTTTACTGGATATCGTTATTATA
GTGAGGTACAATTACCCCTAGCTAATAGAATAAATGCTTTAAAGGATATGGGGTTTAAACTTAGTACTATCGAAAAAATA
TTAAAAGAATATGGTGATAATGAAGCATTAGAAAAATATCTTTTAATAAAGTATGAGGAGTTAAATGAAAAATCAGAAGA
TATAAACAGACGATTAACTTTATTAAAAAGTACAATAAAAAGGTTAAGAAAGGATGAGGATGCAATGAAATATAATGTCA
CATTAAAAGAAATGCCTAAAAGACAGGTAGCAAGCCTTAGAGAAATTATTCCGTCATATGAAATGGAAGGTATTTTGTGG
GAAGAGATAAGAAAAGAAATGGATGCACAAAATGTTCAATTTGGAAACCCATGTAATACAATAGCGGTTTTTCATGACAA
GGGGTATAAAGAAAGTGATGTTGATGTGGAAATACAAATATCAGTGGAAGGCAATTATGAAGATACTAAAAAAGTGAAAT
TTAAAACTGTAGAAGCAATAGAAATAGCTTCTGTAACATTTAAGGGTGGTTACGAACAAATAGGAGAGGTAAATGAAGCT
ATTGCAAATTGGATAGTGGATAATAATTATGAGTTTAACGGTGCTATGTTTAATATTTATCATGTAAGCCCTGCAATGGA
TAAGAATCCAGAAAATTGGGTTAGTGAAGTATGTTATCCTGTAAAGAAAAAATAG

Upstream 100 bases:

>100_bases
AATTGTGTAATTAAAGGTAGTTTGTAGAATTATTTACAGACTACCTTTTTTTAGAAATTTAGGAGTTGACTCTCACATTA
TGTTATAGTTTATACTAAAA

Downstream 100 bases:

>100_bases
TAAGATTTATACTGATTAACTAAAAAAAGTGCTATGCACTTTTTTTAGCTATTTGATATAGGTAATATTATAACAATGGT
AAATTTTTTATTTAATTCGT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGYRYYSEVQLPLANRINALKDMGFKLSTIEKI
LKEYGDNEALEKYLLIKYEELNEKSEDINRRLTLLKSTIKRLRKDEDAMKYNVTLKEMPKRQVASLREIIPSYEMEGILW
EEIRKEMDAQNVQFGNPCNTIAVFHDKGYKESDVDVEIQISVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEA
IANWIVDNNYEFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK

Sequences:

>Translated_284_residues
MSSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGYRYYSEVQLPLANRINALKDMGFKLSTIEKI
LKEYGDNEALEKYLLIKYEELNEKSEDINRRLTLLKSTIKRLRKDEDAMKYNVTLKEMPKRQVASLREIIPSYEMEGILW
EEIRKEMDAQNVQFGNPCNTIAVFHDKGYKESDVDVEIQISVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEA
IANWIVDNNYEFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK
>Mature_283_residues
SSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGYRYYSEVQLPLANRINALKDMGFKLSTIEKIL
KEYGDNEALEKYLLIKYEELNEKSEDINRRLTLLKSTIKRLRKDEDAMKYNVTLKEMPKRQVASLREIIPSYEMEGILWE
EIRKEMDAQNVQFGNPCNTIAVFHDKGYKESDVDVEIQISVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEAI
ANWIVDNNYEFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind; PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 33124; Mature: 32993

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGYRYYSEVQLPL
CCCCEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCEEEEEEECCH
ANRINALKDMGFKLSTIEKILKEYGDNEALEKYLLIKYEELNEKSEDINRRLTLLKSTIK
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHH
RLRKDEDAMKYNVTLKEMPKRQVASLREIIPSYEMEGILWEEIRKEMDAQNVQFGNPCNT
HHHCCCCHHEEEEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCE
IAVFHDKGYKESDVDVEIQISVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEA
EEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHH
IANWIVDNNYEFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK
HHHHHCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGYRYYSEVQLPL
CCCEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCEEEEEEECCH
ANRINALKDMGFKLSTIEKILKEYGDNEALEKYLLIKYEELNEKSEDINRRLTLLKSTIK
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHH
RLRKDEDAMKYNVTLKEMPKRQVASLREIIPSYEMEGILWEEIRKEMDAQNVQFGNPCNT
HHHCCCCHHEEEEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCE
IAVFHDKGYKESDVDVEIQISVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEA
EEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHH
IANWIVDNNYEFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK
HHHHHCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]