Click here to switch to the map view.

The map label for this gene is lip1 [H]

Identifier: 28210658

GI number: 28210658

Start: 1010558

End: 1011931

Strand: Direct

Name: lip1 [H]

Synonym: CTC00947

Alternate gene names: 28210658

Gene position: 1010558-1011931 (Clockwise)

Preceding gene: 28210657

Following gene: 28210659

Centisome position: 36.1

GC content: 31.44

Gene sequence:

>1374_bases
ATGAAAATGAAAAAATCTTTAACCAAAATAACAGGTATTACCTTATTGACATTTTTTATATCACTAACAAATTTTTCAAT
AACTGCTAGAGCAGCAGAACAAAAAGTGAGGACACCACAAAGTATTAAAGAAGAAATAAATAATTCTATGAAATCAGGTA
AAGCTGTTAAAGAAGATGATATTAACGAATTAGCACCACTAGAGTTTCCAGAAATTAATACTAGGAGTATAACAAAGGAT
AATAATTATCCAATTATTTTAGTTCATGGTTTTATGGGATATGGAAGAGATGAGTTATTAGGATATAAATATTGGGGTGG
AGTAGTAGATCTTCAAGAAAAATTAAATAATTCAGGACATAAAGCATATACAGCAACAGTGGGACCAGTATCTAGTAATT
GGGATAGAGCATGTGAACTTTATGCCTATATAGTGGGGGGAACAGTAGACTATGGTGCAGCTCATGCTAAAAAATTTGGG
CATAGTAGATATGGTAGAACCTATCCAGGTTTATATAAAAACATAAGTAATAAAAATAAAATACATTTAATAGGACATAG
TATGGGTGGACAAACTATACGTACACTTACACAATTACTAAGCCAGGGTAGCCAAGAGGAGATAAATTATAAACAAGAAA
ATCTTTCACCTTTATTTCAAGGTGGAAATCACTGGATTCATAGCGTTACTACAATATCAACACCTAATGATGGAACAACT
TTATCGGATTTAATGCCAGCAGGAGAGTTATTAAGCTCTGCATTTGGTGCTTTAGGAACAATAACAGGTAACAATGGTAT
CTTTAACTCATTATATGATTTTAAATTAGATCAATGGGGACTTAAAAAACAAGAAGGCGAATCTCAAAGAAAATATATAA
AAAGAGTTTTAGATAGTGATATTTGGAAGAGAACAAAGGATATAGCAACTTATGATTTATCAACAAAAGGTGCAGAGGAG
CTTAACAAATGGGTAAAGGCTCAGCCAGATGTGTATTATTTTTCTTGGACAACTCAAGCAACTAAAGAATCAGCACTTAC
TGGGCATTCTATAGCACAAATTGGTCCTATGAATCCATTACTTTATGTACCGGCAAATTTAATGGGTAAATATTCACGAA
ATGAGCCAAATCTTCCTATTATTAATAAAGAATGGTTTCCTAATGATGGTGTTGTAAATTGTATTAGTCAAAATGGTCCT
AAGTTAGGTTCAAGTGATATTATTGAACAATATGATGGTACAGCTAAAAAGGGACGATGGAATGCAATGCCTTTAATTAT
AAATACAGATCATATGGATATAACAGGTACTTTTGGTAATGTTAAAGATTGGTATATTGATTATGCAAAGATTTTAAATA
AATTACCAGAATAA

Upstream 100 bases:

>100_bases
TACATATGTTATAGGAATTGGATTCCATAATACTATAATAGTCAAATAAGAATGACTTGTTAATTGATTAGATTTATTTA
AAAAATAAAAAAATAGGAGG

Downstream 100 bases:

>100_bases
AAATAATAATATAATTGTGTAATTAAAGGTAGTTTGTAGAATTATTTACAGACTACCTTTTTTTAGAAATTTAGGAGTTG
ACTCTCACATTATGTTATAG

Product: lipase

Products: NA

Alternate protein names: Glycerol ester hydrolase 1 [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKMKKSLTKITGITLLTFFISLTNFSITARAAEQKVRTPQSIKEEINNSMKSGKAVKEDDINELAPLEFPEINTRSITKD
NNYPIILVHGFMGYGRDELLGYKYWGGVVDLQEKLNNSGHKAYTATVGPVSSNWDRACELYAYIVGGTVDYGAAHAKKFG
HSRYGRTYPGLYKNISNKNKIHLIGHSMGGQTIRTLTQLLSQGSQEEINYKQENLSPLFQGGNHWIHSVTTISTPNDGTT
LSDLMPAGELLSSAFGALGTITGNNGIFNSLYDFKLDQWGLKKQEGESQRKYIKRVLDSDIWKRTKDIATYDLSTKGAEE
LNKWVKAQPDVYYFSWTTQATKESALTGHSIAQIGPMNPLLYVPANLMGKYSRNEPNLPIINKEWFPNDGVVNCISQNGP
KLGSSDIIEQYDGTAKKGRWNAMPLIINTDHMDITGTFGNVKDWYIDYAKILNKLPE

Sequences:

>Translated_457_residues
MKMKKSLTKITGITLLTFFISLTNFSITARAAEQKVRTPQSIKEEINNSMKSGKAVKEDDINELAPLEFPEINTRSITKD
NNYPIILVHGFMGYGRDELLGYKYWGGVVDLQEKLNNSGHKAYTATVGPVSSNWDRACELYAYIVGGTVDYGAAHAKKFG
HSRYGRTYPGLYKNISNKNKIHLIGHSMGGQTIRTLTQLLSQGSQEEINYKQENLSPLFQGGNHWIHSVTTISTPNDGTT
LSDLMPAGELLSSAFGALGTITGNNGIFNSLYDFKLDQWGLKKQEGESQRKYIKRVLDSDIWKRTKDIATYDLSTKGAEE
LNKWVKAQPDVYYFSWTTQATKESALTGHSIAQIGPMNPLLYVPANLMGKYSRNEPNLPIINKEWFPNDGVVNCISQNGP
KLGSSDIIEQYDGTAKKGRWNAMPLIINTDHMDITGTFGNVKDWYIDYAKILNKLPE
>Mature_457_residues
MKMKKSLTKITGITLLTFFISLTNFSITARAAEQKVRTPQSIKEEINNSMKSGKAVKEDDINELAPLEFPEINTRSITKD
NNYPIILVHGFMGYGRDELLGYKYWGGVVDLQEKLNNSGHKAYTATVGPVSSNWDRACELYAYIVGGTVDYGAAHAKKFG
HSRYGRTYPGLYKNISNKNKIHLIGHSMGGQTIRTLTQLLSQGSQEEINYKQENLSPLFQGGNHWIHSVTTISTPNDGTT
LSDLMPAGELLSSAFGALGTITGNNGIFNSLYDFKLDQWGLKKQEGESQRKYIKRVLDSDIWKRTKDIATYDLSTKGAEE
LNKWVKAQPDVYYFSWTTQATKESALTGHSIAQIGPMNPLLYVPANLMGKYSRNEPNLPIINKEWFPNDGVVNCISQNGP
KLGSSDIIEQYDGTAKKGRWNAMPLIINTDHMDITGTFGNVKDWYIDYAKILNKLPE

Specific function: Unknown

COG id: COG1075

COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877 [H]

Pfam domain/function: PF04650 YSIRK_signal [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 51092; Mature: 51092

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKKSLTKITGITLLTFFISLTNFSITARAAEQKVRTPQSIKEEINNSMKSGKAVKEDD
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
INELAPLEFPEINTRSITKDNNYPIILVHGFMGYGRDELLGYKYWGGVVDLQEKLNNSGH
HHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHCCCHHCCCHHHHHHHCCCCCC
KAYTATVGPVSSNWDRACELYAYIVGGTVDYGAAHAKKFGHSRYGRTYPGLYKNISNKNK
EEEEEEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCE
IHLIGHSMGGQTIRTLTQLLSQGSQEEINYKQENLSPLFQGGNHWIHSVTTISTPNDGTT
EEEEEECCCCHHHHHHHHHHHCCCHHHCCCCHHCCCHHHHCCCEEEEEEEEECCCCCCCC
LSDLMPAGELLSSAFGALGTITGNNGIFNSLYDFKLDQWGLKKQEGESQRKYIKRVLDSD
HHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
IWKRTKDIATYDLSTKGAEELNKWVKAQPDVYYFSWTTQATKESALTGHSIAQIGPMNPL
HHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCCCHHHCCCCCCE
LYVPANLMGKYSRNEPNLPIINKEWFPNDGVVNCISQNGPKLGSSDIIEQYDGTAKKGRW
EEECHHHHCCCCCCCCCCCEECCCCCCCCCEEEHCCCCCCCCCCHHHHHHHCCCCCCCCC
NAMPLIINTDHMDITGTFGNVKDWYIDYAKILNKLPE
CCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMKKSLTKITGITLLTFFISLTNFSITARAAEQKVRTPQSIKEEINNSMKSGKAVKEDD
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
INELAPLEFPEINTRSITKDNNYPIILVHGFMGYGRDELLGYKYWGGVVDLQEKLNNSGH
HHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHCCCHHCCCHHHHHHHCCCCCC
KAYTATVGPVSSNWDRACELYAYIVGGTVDYGAAHAKKFGHSRYGRTYPGLYKNISNKNK
EEEEEEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCE
IHLIGHSMGGQTIRTLTQLLSQGSQEEINYKQENLSPLFQGGNHWIHSVTTISTPNDGTT
EEEEEECCCCHHHHHHHHHHHCCCHHHCCCCHHCCCHHHHCCCEEEEEEEEECCCCCCCC
LSDLMPAGELLSSAFGALGTITGNNGIFNSLYDFKLDQWGLKKQEGESQRKYIKRVLDSD
HHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
IWKRTKDIATYDLSTKGAEELNKWVKAQPDVYYFSWTTQATKESALTGHSIAQIGPMNPL
HHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCCCHHHCCCCCCE
LYVPANLMGKYSRNEPNLPIINKEWFPNDGVVNCISQNGPKLGSSDIIEQYDGTAKKGRW
EEECHHHHCCCCCCCCCCCEECCCCCCCCCEEEHCCCCCCCCCCHHHHHHHCCCCCCCCC
NAMPLIINTDHMDITGTFGNVKDWYIDYAKILNKLPE
CCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA