Click here to switch to the map view.

The map label for this gene is mcpC [H]

Identifier: 28210600

GI number: 28210600

Start: 941464

End: 943563

Strand: Direct

Name: mcpC [H]

Synonym: CTC00888

Alternate gene names: 28210600

Gene position: 941464-943563 (Clockwise)

Preceding gene: 28210599

Following gene: 28210603

Centisome position: 33.63

GC content: 29.81

Gene sequence:

>2100_bases
GTGAGGGAGGGGATTAAAATCAAATCTTTAAAAAATAAGCTTGTGACAATATCCATATTTTTAGTAGCTATTCCTGTCTG
TTTATCTATTTTTATTTCTAATTATTATATGAATAAAAATCTTAGACCTCATATACACGAAGATCATAATATACTATCTA
ATACGATAGCTAATGGTGTAGCAGATTATATGACTAAGGCCTATGCTTTAACAGAAGAATTGATAAGTAATGATTATGTT
AGAGAGTTTAATGCCGAGAAGCAAAATTTGGCTGTAAAGGATGCCATAAAGAGAAATCCATATTTTGACTTGTTTTGTAT
ACAGAACATGAAAGGAGATCAGACAGCTAGAAGTAGGGGGCATTTAGCCAATAGAGCAGATAGATGGTGGTTTAAACAAA
GTGTCAAAACCAAAAAGCCTTTTGTAAGTAAATCTTATTTAACGGTAAATGATAATAGTGAAGCTATAAATTCCATCATA
TTTCCCATTATAGATAATAAAGGGCAGATGCGAGGAGTAATGGATGCAGATCTAAAACTTGATGAGCTTCAAAAAATGGT
TGAAAAATATAGTACAGATAATACTTATGCATATGTAATAGATGGGAATGGGGCAGTTATAGCACATCCTAATAAAGAAA
AAGTCCAAGAAATATATAATTATAAAACATTACAAAAAACTGTCAGACAAAAGGATTCATCAGGTAAAGTGATAAAAGAT
AAAAATGATGTACCAGTAACAAAAACAGAAACTATAGAAGTAGTAGATAAATTAAAGGAAATAGTAGGGCTGGCATTAAC
CGGTAAACATGGAATAGTAGAATATAAAGATAAAGATGGAGAAAAAGTAATAAGTTCTTATGGAACTATAAATCTTCCAG
GAGATTCAGATAATTGGGCGGTAATAACAACCCAAAAAGAAAAAGACGCTTTTGCAATGATATATGATATTAGAAATAGG
ATTATGATAGTAGGATTTATAGTATTACTATTAGCCATAATATTATCTTATATAGTATCTGCAAGACTTATTAAACCTTT
AACCAATTTATCAGAATTAACACAAAGAGCGGCAAAGGGAGATTTGACGGTTAAATCAGACTATCATTCAGAAGATGAAA
TAGGTGCATTAAGTATATCTTTTAATAATATGATCGATAATATGAAAGCACTTATATTTAATATAAAAGAAGTTACAGAA
GTTGTAACAAATGCAACTGAAAGTTTATTAGCTTCTACTCAGCAGACATCAAGTTCTATAAATGAAGTTGCTGAAAGTAT
GACCAATGTAGCAGTAGATATAGAAAAAGGATCAGAAAATGCAAAAGATGGAGTTAAATCAGCCACTGATTTATCAAAGG
AATTGGACTCAGTTTCTAAAAAGATAGTAGAAAGTGAAGAATCCTCTAAAAATGTATATAACATATCTAATAATGGGTTT
GAAGTTATTAGAAAGTTAGAAGAGAAAAATGAAAGAAGTAGTGTAGTTTCAAGGGAAGTTACAGAAGTTATAAATTCTTT
AAGTGAAAAAGCAAATAATATAGGAACAATAGTAGAAACTATAAACTCTATTTCAGAAGAAACAAATTTACTAGCTTTAA
ATGCAGCCATAGAGGCAGCAAGAGCAGGAGAAGCAGGAAAAGGATTTTCAGTAGTGGCAGAAGAAGTAAGGAAATTATCA
GAGAATACAGCAGAATCAACTAATAATGTAAAATCTATTATAAGCAATATACAAAAAGATATTAAACTTGCTCAAGGTAC
AATTAAACAAATAGAGGAAGTGGGAATAGAACAAAATGAAGCAGTTAATATTACAAAAGATACATTTAAAGAAATAAATA
CTTCAATAGAAGGAATTGTAGAAAAAATTAATACAATATCTGAAAGCTTATTTAGTGTTGATAGCTGTAAGACTAATTTA
ATATCAGTAGTAGAACAGGTATCCTTTATGGCAGAAGGTGTAGCTGAAGCTACACAAAATGTATGTGGAGCTACAGAAGA
GCAAAATGCTGAAATGGAACAAATAAGTGCTTTAGCAGAAGATTTAAATAATATGACACAAAAGTTAATAGGAGAAGTTA
AAAGCTTTAAGATAGAATAA

Upstream 100 bases:

>100_bases
TTTAAAAGAGAGTTAATTTAATCTTTACTACACTAATTATATTATATCAAAAGGGGGTGATATGAGTTTTAGCGAGGTAT
ATATTTTTTAGATTAATATT

Downstream 100 bases:

>100_bases
AAAGTAAGGGATAAACCCTTACTTTTTATTAATTTCTTTATAGTGAGCAATTCTTTCTTTTCTGTAAAGGCTTTTAGGTT
CTAAGTTAATTCTCTTATTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MREGIKIKSLKNKLVTISIFLVAIPVCLSIFISNYYMNKNLRPHIHEDHNILSNTIANGVADYMTKAYALTEELISNDYV
REFNAEKQNLAVKDAIKRNPYFDLFCIQNMKGDQTARSRGHLANRADRWWFKQSVKTKKPFVSKSYLTVNDNSEAINSII
FPIIDNKGQMRGVMDADLKLDELQKMVEKYSTDNTYAYVIDGNGAVIAHPNKEKVQEIYNYKTLQKTVRQKDSSGKVIKD
KNDVPVTKTETIEVVDKLKEIVGLALTGKHGIVEYKDKDGEKVISSYGTINLPGDSDNWAVITTQKEKDAFAMIYDIRNR
IMIVGFIVLLLAIILSYIVSARLIKPLTNLSELTQRAAKGDLTVKSDYHSEDEIGALSISFNNMIDNMKALIFNIKEVTE
VVTNATESLLASTQQTSSSINEVAESMTNVAVDIEKGSENAKDGVKSATDLSKELDSVSKKIVESEESSKNVYNISNNGF
EVIRKLEEKNERSSVVSREVTEVINSLSEKANNIGTIVETINSISEETNLLALNAAIEAARAGEAGKGFSVVAEEVRKLS
ENTAESTNNVKSIISNIQKDIKLAQGTIKQIEEVGIEQNEAVNITKDTFKEINTSIEGIVEKINTISESLFSVDSCKTNL
ISVVEQVSFMAEGVAEATQNVCGATEEQNAEMEQISALAEDLNNMTQKLIGEVKSFKIE

Sequences:

>Translated_699_residues
MREGIKIKSLKNKLVTISIFLVAIPVCLSIFISNYYMNKNLRPHIHEDHNILSNTIANGVADYMTKAYALTEELISNDYV
REFNAEKQNLAVKDAIKRNPYFDLFCIQNMKGDQTARSRGHLANRADRWWFKQSVKTKKPFVSKSYLTVNDNSEAINSII
FPIIDNKGQMRGVMDADLKLDELQKMVEKYSTDNTYAYVIDGNGAVIAHPNKEKVQEIYNYKTLQKTVRQKDSSGKVIKD
KNDVPVTKTETIEVVDKLKEIVGLALTGKHGIVEYKDKDGEKVISSYGTINLPGDSDNWAVITTQKEKDAFAMIYDIRNR
IMIVGFIVLLLAIILSYIVSARLIKPLTNLSELTQRAAKGDLTVKSDYHSEDEIGALSISFNNMIDNMKALIFNIKEVTE
VVTNATESLLASTQQTSSSINEVAESMTNVAVDIEKGSENAKDGVKSATDLSKELDSVSKKIVESEESSKNVYNISNNGF
EVIRKLEEKNERSSVVSREVTEVINSLSEKANNIGTIVETINSISEETNLLALNAAIEAARAGEAGKGFSVVAEEVRKLS
ENTAESTNNVKSIISNIQKDIKLAQGTIKQIEEVGIEQNEAVNITKDTFKEINTSIEGIVEKINTISESLFSVDSCKTNL
ISVVEQVSFMAEGVAEATQNVCGATEEQNAEMEQISALAEDLNNMTQKLIGEVKSFKIE
>Mature_699_residues
MREGIKIKSLKNKLVTISIFLVAIPVCLSIFISNYYMNKNLRPHIHEDHNILSNTIANGVADYMTKAYALTEELISNDYV
REFNAEKQNLAVKDAIKRNPYFDLFCIQNMKGDQTARSRGHLANRADRWWFKQSVKTKKPFVSKSYLTVNDNSEAINSII
FPIIDNKGQMRGVMDADLKLDELQKMVEKYSTDNTYAYVIDGNGAVIAHPNKEKVQEIYNYKTLQKTVRQKDSSGKVIKD
KNDVPVTKTETIEVVDKLKEIVGLALTGKHGIVEYKDKDGEKVISSYGTINLPGDSDNWAVITTQKEKDAFAMIYDIRNR
IMIVGFIVLLLAIILSYIVSARLIKPLTNLSELTQRAAKGDLTVKSDYHSEDEIGALSISFNNMIDNMKALIFNIKEVTE
VVTNATESLLASTQQTSSSINEVAESMTNVAVDIEKGSENAKDGVKSATDLSKELDSVSKKIVESEESSKNVYNISNNGF
EVIRKLEEKNERSSVVSREVTEVINSLSEKANNIGTIVETINSISEETNLLALNAAIEAARAGEAGKGFSVVAEEVRKLS
ENTAESTNNVKSIISNIQKDIKLAQGTIKQIEEVGIEQNEAVNITKDTFKEINTSIEGIVEKINTISESLFSVDSCKTNL
ISVVEQVSFMAEGVAEATQNVCGATEEQNAEMEQISALAEDLNNMTQKLIGEVKSFKIE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=332, Percent_Identity=26.5060240963855, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI2367378, Length=303, Percent_Identity=25.7425742574257, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1789453, Length=342, Percent_Identity=23.9766081871345, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI1788195, Length=245, Percent_Identity=24.0816326530612, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788194, Length=389, Percent_Identity=22.6221079691517, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 77564; Mature: 77564

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREGIKIKSLKNKLVTISIFLVAIPVCLSIFISNYYMNKNLRPHIHEDHNILSNTIANGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ADYMTKAYALTEELISNDYVREFNAEKQNLAVKDAIKRNPYFDLFCIQNMKGDQTARSRG
HHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHC
HLANRADRWWFKQSVKTKKPFVSKSYLTVNDNSEAINSIIFPIIDNKGQMRGVMDADLKL
CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCCH
DELQKMVEKYSTDNTYAYVIDGNGAVIAHPNKEKVQEIYNYKTLQKTVRQKDSSGKVIKD
HHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
KNDVPVTKTETIEVVDKLKEIVGLALTGKHGIVEYKDKDGEKVISSYGTINLPGDSDNWA
CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHCCEEECCCCCCCEE
VITTQKEKDAFAMIYDIRNRIMIVGFIVLLLAIILSYIVSARLIKPLTNLSELTQRAAKG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLTVKSDYHSEDEIGALSISFNNMIDNMKALIFNIKEVTEVVTNATESLLASTQQTSSSI
CCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEVAESMTNVAVDIEKGSENAKDGVKSATDLSKELDSVSKKIVESEESSKNVYNISNNGF
HHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHH
EVIRKLEEKNERSSVVSREVTEVINSLSEKANNIGTIVETINSISEETNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH
RAGEAGKGFSVVAEEVRKLSENTAESTNNVKSIISNIQKDIKLAQGTIKQIEEVGIEQNE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AVNITKDTFKEINTSIEGIVEKINTISESLFSVDSCKTNLISVVEQVSFMAEGVAEATQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCGATEEQNAEMEQISALAEDLNNMTQKLIGEVKSFKIE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREGIKIKSLKNKLVTISIFLVAIPVCLSIFISNYYMNKNLRPHIHEDHNILSNTIANGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ADYMTKAYALTEELISNDYVREFNAEKQNLAVKDAIKRNPYFDLFCIQNMKGDQTARSRG
HHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHC
HLANRADRWWFKQSVKTKKPFVSKSYLTVNDNSEAINSIIFPIIDNKGQMRGVMDADLKL
CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCCCCH
DELQKMVEKYSTDNTYAYVIDGNGAVIAHPNKEKVQEIYNYKTLQKTVRQKDSSGKVIKD
HHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
KNDVPVTKTETIEVVDKLKEIVGLALTGKHGIVEYKDKDGEKVISSYGTINLPGDSDNWA
CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHCCEEECCCCCCCEE
VITTQKEKDAFAMIYDIRNRIMIVGFIVLLLAIILSYIVSARLIKPLTNLSELTQRAAKG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLTVKSDYHSEDEIGALSISFNNMIDNMKALIFNIKEVTEVVTNATESLLASTQQTSSSI
CCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEVAESMTNVAVDIEKGSENAKDGVKSATDLSKELDSVSKKIVESEESSKNVYNISNNGF
HHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHH
EVIRKLEEKNERSSVVSREVTEVINSLSEKANNIGTIVETINSISEETNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH
RAGEAGKGFSVVAEEVRKLSENTAESTNNVKSIISNIQKDIKLAQGTIKQIEEVGIEQNE
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AVNITKDTFKEINTSIEGIVEKINTISESLFSVDSCKTNLISVVEQVSFMAEGVAEATQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCGATEEQNAEMEQISALAEDLNNMTQKLIGEVKSFKIE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]