| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is mglB [H]
Identifier: 28210576
GI number: 28210576
Start: 912767
End: 913855
Strand: Direct
Name: mglB [H]
Synonym: CTC00860
Alternate gene names: 28210576
Gene position: 912767-913855 (Clockwise)
Preceding gene: 28210573
Following gene: 28210577
Centisome position: 32.61
GC content: 33.7
Gene sequence:
>1089_bases ATGATTATGTTAATTAAATCATGTAAATTTGGGGGTGTCTTAATGAAAAAGATTATATCACTTGTTACCGCAGCGGTATT AGCAACTACTCTATTTGCAGGTTGTGGTTCTGGAAAAGAGAAAGGAGGAAAAGAAGGAAAAGAACTTAAAGTGGGAGTAG CCCTATATAAGTTTGATGATACTTTTATATCTACAGTTAGAGATGCTATTAAAGAAAATTCAGATGTAAAGTCTAAAGAA ACAGGAGAAAAAATTGTTATAAATGCTGTTGATGGACAAGGTCAACAAGCAACCCAAAATGATCAAGTAGATACATTTAT TACTCAAGGGTATGATGTTATAGCTGTTAATATGGTAGATAGAACTGCAGCTTCTGTTCTTATAGAAAAAGCTGAAAAAG CTAATATTCCTGTTGTATTTTTCAATCGTGAACCTGTAAAGGAAGATATGGATAAATGGAATAAGATGTATTATGTAGGA GCAAAAGCTGAAGAATCGGGAGCTATGCAAGGGCAAATAATTGCAGATTACTGGAAGAAGAATCCTACAGCAGATAAGAA TAAAGATGGAAAGTTACAATATGTAATGTTAGAAGGAGAACCAGGACATCAAGATGCAATACTTCGTACAGAACATTCAG TTAAGGAGTTAGAAAAAGAAGGTATAAAAACAGAAAAATTAGCTACAGATACTGCAAATTGGCAAAGAGCACAAGGACAA GAAAAAATGTCAGCTTGGTTATCTGCTTATGGGGACAAGGTAGAAGCAGTATTTGCAAATAACGATGATATGGCTCTAGG AGCTATAGAAGCTCTTAAGGCAGCAGGTTATTATAAAGGAGATAAATTTATACCAGTTGTAGGTGTAGATGCTACTGCAC CAGCATTAGATTCATTAAAAGCAGGTGAAATGCTAGGAACGGTATTAAATGATGCTAAAAACCAAGGAAAAGCTATATTT GATATAGCATATTCATTAGCTAAAGAGGAAGATCCTATTAAATCAGTAGAGGGAATAACTGATGGGAAATATAAATGGGT TCCATATAAATCTATAACTAAGGAAAACTTAAAGGATGTAGAAAAATAG
Upstream 100 bases:
>100_bases GAGGGATTTTTTGATAGGATAATAGAAAAGGTTTTCTTTTATCATTTTAGAAGTAAGAATAATAGTAATAACACTATTAC TTTTATAATATAAATACAAC
Downstream 100 bases:
>100_bases AATATATTAGTTCAGGGAAGATTTTCCCTGAACATTATTTACATATCACATATGTAGAATAATTCTCAAAGAGGTGTATC TATATGGTGGAAAATAATAT
Product: D-galactose-binding periplasmic protein precursor
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: GBP; D-galactose/ D-glucose-binding protein; GGBP [H]
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MIMLIKSCKFGGVLMKKIISLVTAAVLATTLFAGCGSGKEKGGKEGKELKVGVALYKFDDTFISTVRDAIKENSDVKSKE TGEKIVINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVDRTAASVLIEKAEKANIPVVFFNREPVKEDMDKWNKMYYVG AKAEESGAMQGQIIADYWKKNPTADKNKDGKLQYVMLEGEPGHQDAILRTEHSVKELEKEGIKTEKLATDTANWQRAQGQ EKMSAWLSAYGDKVEAVFANNDDMALGAIEALKAAGYYKGDKFIPVVGVDATAPALDSLKAGEMLGTVLNDAKNQGKAIF DIAYSLAKEEDPIKSVEGITDGKYKWVPYKSITKENLKDVEK
Sequences:
>Translated_362_residues MIMLIKSCKFGGVLMKKIISLVTAAVLATTLFAGCGSGKEKGGKEGKELKVGVALYKFDDTFISTVRDAIKENSDVKSKE TGEKIVINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVDRTAASVLIEKAEKANIPVVFFNREPVKEDMDKWNKMYYVG AKAEESGAMQGQIIADYWKKNPTADKNKDGKLQYVMLEGEPGHQDAILRTEHSVKELEKEGIKTEKLATDTANWQRAQGQ EKMSAWLSAYGDKVEAVFANNDDMALGAIEALKAAGYYKGDKFIPVVGVDATAPALDSLKAGEMLGTVLNDAKNQGKAIF DIAYSLAKEEDPIKSVEGITDGKYKWVPYKSITKENLKDVEK >Mature_362_residues MIMLIKSCKFGGVLMKKIISLVTAAVLATTLFAGCGSGKEKGGKEGKELKVGVALYKFDDTFISTVRDAIKENSDVKSKE TGEKIVINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVDRTAASVLIEKAEKANIPVVFFNREPVKEDMDKWNKMYYVG AKAEESGAMQGQIIADYWKKNPTADKNKDGKLQYVMLEGEPGHQDAILRTEHSVKELEKEGIKTEKLATDTANWQRAQGQ EKMSAWLSAYGDKVEAVFANNDDMALGAIEALKAAGYYKGDKFIPVVGVDATAPALDSLKAGEMLGTVLNDAKNQGKAIF DIAYSLAKEEDPIKSVEGITDGKYKWVPYKSITKENLKDVEK
Specific function: This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=350, Percent_Identity=44, Blast_Score=284, Evalue=7e-78, Organism=Escherichia coli, GI1790192, Length=294, Percent_Identity=26.8707482993197, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790674, Length=212, Percent_Identity=28.7735849056604, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789990, Length=327, Percent_Identity=24.4648318042813, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 39592; Mature: 39592
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMLIKSCKFGGVLMKKIISLVTAAVLATTLFAGCGSGKEKGGKEGKELKVGVALYKFDD CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECH TFISTVRDAIKENSDVKSKETGEKIVINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVD HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEHH RTAASVLIEKAEKANIPVVFFNREPVKEDMDKWNKMYYVGAKAEESGAMQGQIIADYWKK HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHCC NPTADKNKDGKLQYVMLEGEPGHQDAILRTEHSVKELEKEGIKTEKLATDTANWQRAQGQ CCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCH EKMSAWLSAYGDKVEAVFANNDDMALGAIEALKAAGYYKGDKFIPVVGVDATAPALDSLK HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH AGEMLGTVLNDAKNQGKAIFDIAYSLAKEEDPIKSVEGITDGKYKWVPYKSITKENLKDV HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHH EK CC >Mature Secondary Structure MIMLIKSCKFGGVLMKKIISLVTAAVLATTLFAGCGSGKEKGGKEGKELKVGVALYKFDD CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECH TFISTVRDAIKENSDVKSKETGEKIVINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVD HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEEEHH RTAASVLIEKAEKANIPVVFFNREPVKEDMDKWNKMYYVGAKAEESGAMQGQIIADYWKK HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHCC NPTADKNKDGKLQYVMLEGEPGHQDAILRTEHSVKELEKEGIKTEKLATDTANWQRAQGQ CCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCH EKMSAWLSAYGDKVEAVFANNDDMALGAIEALKAAGYYKGDKFIPVVGVDATAPALDSLK HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH AGEMLGTVLNDAKNQGKAIFDIAYSLAKEEDPIKSVEGITDGKYKWVPYKSITKENLKDV HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHH EK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA