| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210557
Identifier: 28210557
GI number: 28210557
Start: 890763
End: 891866
Strand: Direct
Name: 28210557
Synonym: CTC00840
Alternate gene names: NA
Gene position: 890763-891866 (Clockwise)
Preceding gene: 28210556
Following gene: 28210559
Centisome position: 31.82
GC content: 27.45
Gene sequence:
>1104_bases ATGGTTAAAAAGTATGCTAATATAAGTGTAGCACTTATATTAATATTTATATTATTATATATTCCCAAATGGCCTTCCTA CATAAAAGAACAGATACCATTTAAGAGCATAGTAAGTAAATTTAATAGAGAGAAATTTTTAGAAGGAAAAATTAAATCTG CTAATCTGTCAATGGATTATAATATTGATATGGTGATGAAAGATGTAGATAGATTAAATTTAAATACTGTGAATGTACCT GTAATGGTTGAAATTAAATCTTTAACATCTACGGAGATGAGAATAAATGAAGAAAGTAAAAAGAAGGCACGAAAACTCAT AAAAAAATTAAAGAAAAATAATATAATGGTTATTTTAGAAGCCTATCCTTGGATAAAAGACGGAGAACTTTATGAAACGG ATTGGAAGCCAGATGATATTAATGAGTTTTTTTGGAAATGGAAAACAGAAATACTAAATGAACTAATAGAAGATATAGCA AATCCTTTAAAGGTAGAGGTTTTAAATGTAGCTTCTAATTTTGTAAATATGGAATATGCAGAAGGTTATTGGTGTGAAAC TATTGATTATGTAAAAGAGAGATTTAACGGGTTAATAACTTATAGAACAAATTGGTGGTATACAGCTGATTGGGATTACA AAACTCAAGAATCATATAATAAAAAGCTGGACAATCAACTTTTTTCAAAGGTAGATTTTATAAGTATAGCAGCTTATTTT GAATTAACAGATAATGATACTAATGAAGTAAGAAATTTGGTCAAAGCATTAAACTCAACAGAAAGACATAATAGAAATCA GAATGTAAAAGAGGAATTAAAAACATTTCATAATAAATGGAGTAAGCCTATATTCTTTGGAGAGTTAGGATTTCCTAAAA GAAATAAAGCTTCTATAAAGCCTTGGTATGTAAATGTATCTAATATAGAAAATGGACAAGAGCAAGCTAATTGTTTCGAA GCGTATAGACAAGTTTTTGAAAAGGAAACTTGGCTACTAGGTTTTTCAGTATTTGCTATAGGGGAAAATGGGAAGGATAA GGTATATTATCCATCAAAAGAAACTATTAAGATAATTTCTAAATGGTATGAAAAAAAGAAATAA
Upstream 100 bases:
>100_bases TATTGATATCTGGATTATATTTAGGAAGGTATAAAAAGAACAAATAAAATTAAATATTATAATTTAATATAAAAATCATT ATTAAGAGAGGAAGGGACTT
Downstream 100 bases:
>100_bases TAGAAAAATTGCTATAAAACTGTACAGTTTTATAGCAATTTTTTTTGGTTATTAGGAAACCATCCTTTCTTAACTCTTTC CTTTTGCTGAAATAATTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MVKKYANISVALILIFILLYIPKWPSYIKEQIPFKSIVSKFNREKFLEGKIKSANLSMDYNIDMVMKDVDRLNLNTVNVP VMVEIKSLTSTEMRINEESKKKARKLIKKLKKNNIMVILEAYPWIKDGELYETDWKPDDINEFFWKWKTEILNELIEDIA NPLKVEVLNVASNFVNMEYAEGYWCETIDYVKERFNGLITYRTNWWYTADWDYKTQESYNKKLDNQLFSKVDFISIAAYF ELTDNDTNEVRNLVKALNSTERHNRNQNVKEELKTFHNKWSKPIFFGELGFPKRNKASIKPWYVNVSNIENGQEQANCFE AYRQVFEKETWLLGFSVFAIGENGKDKVYYPSKETIKIISKWYEKKK
Sequences:
>Translated_367_residues MVKKYANISVALILIFILLYIPKWPSYIKEQIPFKSIVSKFNREKFLEGKIKSANLSMDYNIDMVMKDVDRLNLNTVNVP VMVEIKSLTSTEMRINEESKKKARKLIKKLKKNNIMVILEAYPWIKDGELYETDWKPDDINEFFWKWKTEILNELIEDIA NPLKVEVLNVASNFVNMEYAEGYWCETIDYVKERFNGLITYRTNWWYTADWDYKTQESYNKKLDNQLFSKVDFISIAAYF ELTDNDTNEVRNLVKALNSTERHNRNQNVKEELKTFHNKWSKPIFFGELGFPKRNKASIKPWYVNVSNIENGQEQANCFE AYRQVFEKETWLLGFSVFAIGENGKDKVYYPSKETIKIISKWYEKKK >Mature_367_residues MVKKYANISVALILIFILLYIPKWPSYIKEQIPFKSIVSKFNREKFLEGKIKSANLSMDYNIDMVMKDVDRLNLNTVNVP VMVEIKSLTSTEMRINEESKKKARKLIKKLKKNNIMVILEAYPWIKDGELYETDWKPDDINEFFWKWKTEILNELIEDIA NPLKVEVLNVASNFVNMEYAEGYWCETIDYVKERFNGLITYRTNWWYTADWDYKTQESYNKKLDNQLFSKVDFISIAAYF ELTDNDTNEVRNLVKALNSTERHNRNQNVKEELKTFHNKWSKPIFFGELGFPKRNKASIKPWYVNVSNIENGQEQANCFE AYRQVFEKETWLLGFSVFAIGENGKDKVYYPSKETIKIISKWYEKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43681; Mature: 43681
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKYANISVALILIFILLYIPKWPSYIKEQIPFKSIVSKFNREKFLEGKIKSANLSMDY CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECC NIDMVMKDVDRLNLNTVNVPVMVEIKSLTSTEMRINEESKKKARKLIKKLKKNNIMVILE CHHHHHHHHHHCCCEEECCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEE AYPWIKDGELYETDWKPDDINEFFWKWKTEILNELIEDIANPLKVEVLNVASNFVNMEYA CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCC EGYWCETIDYVKERFNGLITYRTNWWYTADWDYKTQESYNKKLDNQLFSKVDFISIAAYF CCCHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEEE ELTDNDTNEVRNLVKALNSTERHNRNQNVKEELKTFHNKWSKPIFFGELGFPKRNKASIK EECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC PWYVNVSNIENGQEQANCFEAYRQVFEKETWLLGFSVFAIGENGKDKVYYPSKETIKIIS EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHH KWYEKKK HHHHCCC >Mature Secondary Structure MVKKYANISVALILIFILLYIPKWPSYIKEQIPFKSIVSKFNREKFLEGKIKSANLSMDY CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECC NIDMVMKDVDRLNLNTVNVPVMVEIKSLTSTEMRINEESKKKARKLIKKLKKNNIMVILE CHHHHHHHHHHCCCEEECCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEE AYPWIKDGELYETDWKPDDINEFFWKWKTEILNELIEDIANPLKVEVLNVASNFVNMEYA CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCC EGYWCETIDYVKERFNGLITYRTNWWYTADWDYKTQESYNKKLDNQLFSKVDFISIAAYF CCCHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEEE ELTDNDTNEVRNLVKALNSTERHNRNQNVKEELKTFHNKWSKPIFFGELGFPKRNKASIK EECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC PWYVNVSNIENGQEQANCFEAYRQVFEKETWLLGFSVFAIGENGKDKVYYPSKETIKIIS EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHH KWYEKKK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA