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The map label for this gene is ydaK [H]

Identifier: 28210553

GI number: 28210553

Start: 884772

End: 885617

Strand: Direct

Name: ydaK [H]

Synonym: CTC00836

Alternate gene names: 28210553

Gene position: 884772-885617 (Clockwise)

Preceding gene: 28210552

Following gene: 28210554

Centisome position: 31.61

GC content: 23.52

Gene sequence:

>846_bases
ATGAATAAAACTATAAAAAAATTAGATGCTTATATACTTTTGTTCCTATTAGACTTATTTTGTATTCTAAGTTTTTTATT
TTTTAATATAGATAAAAACACTATAATAGATTTTATTATGCTTTCAGTTTTATTTTTAATTTTATTTATTTCTTATTTTA
AAAGAACTGTTTGGAGTATAATATCTAGTGCTATATCTATATTTGGATTAGGCAGTTATACCTTATATAATAATTTGGTC
TATGGTATAGAAGTGATAATAAATACTTATATGTGGATGCTTGCAATACCTATAACTGCTGTTCTACTTGCTAAAATAGG
AGAATATATTAATATCTTAGAAGATACTAATATAAATCTTCAACAAGAGTGTGAGAACTTAGTAACCATTGATAAGACTA
CAGGACTGGGAAATATAAAAAGTTTTTATATGGATCTTGATAAAGAAATAAGTAAGTCTAAAAGATATGAAAAGCCATTA
TCATTGATGATGATAAAGTTAGAGTTTTATGATGAAATAAAAGCATTAATAGGAGAAATAAAAATGAAAGAACTATTAAA
GGAAATAGGAAAAATAATAACATCCTTTACTAGAAAAGAAGATATAAGTTGTAAATTAGGACAAGATACTTTGGCTATAT
TAATGCCAGAAACAGATAAAAATGGAGCAGAAGTAGTTAAAGCCAGAATTAAAGAAACTTTAAAAGAAATAAATTTAAAT
AAAAACAAGGAAAATAATCATATTAACTTAGATATAAAAATAGGGATTTTACAGTATGATAAAACGGTAGAAAATGCTTT
TGAATTTAAGAAAATAGCTGAAAAAGAGTTAGAGTACGATGTATAA

Upstream 100 bases:

>100_bases
AATATAAGTAGAAATAGATGATTAATACTATACCGAATTTGTAAAATAAAGACCAGCTAGTAAAAGTCAATAAGAAATTT
TAATACGAGGTGGGGTAGTA

Downstream 100 bases:

>100_bases
GAGTTATAAATTAAGAAAAAATAATAAGAGTATACAAATAGTATCAATTATATTATCTATAATATTATTTCTAAGTATAA
TATTAGTTTCACTAAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNKTIKKLDAYILLFLLDLFCILSFLFFNIDKNTIIDFIMLSVLFLILFISYFKRTVWSIISSAISIFGLGSYTLYNNLV
YGIEVIINTYMWMLAIPITAVLLAKIGEYINILEDTNINLQQECENLVTIDKTTGLGNIKSFYMDLDKEISKSKRYEKPL
SLMMIKLEFYDEIKALIGEIKMKELLKEIGKIITSFTRKEDISCKLGQDTLAILMPETDKNGAEVVKARIKETLKEINLN
KNKENNHINLDIKIGILQYDKTVENAFEFKKIAEKELEYDV

Sequences:

>Translated_281_residues
MNKTIKKLDAYILLFLLDLFCILSFLFFNIDKNTIIDFIMLSVLFLILFISYFKRTVWSIISSAISIFGLGSYTLYNNLV
YGIEVIINTYMWMLAIPITAVLLAKIGEYINILEDTNINLQQECENLVTIDKTTGLGNIKSFYMDLDKEISKSKRYEKPL
SLMMIKLEFYDEIKALIGEIKMKELLKEIGKIITSFTRKEDISCKLGQDTLAILMPETDKNGAEVVKARIKETLKEINLN
KNKENNHINLDIKIGILQYDKTVENAFEFKKIAEKELEYDV
>Mature_281_residues
MNKTIKKLDAYILLFLLDLFCILSFLFFNIDKNTIIDFIMLSVLFLILFISYFKRTVWSIISSAISIFGLGSYTLYNNLV
YGIEVIINTYMWMLAIPITAVLLAKIGEYINILEDTNINLQQECENLVTIDKTTGLGNIKSFYMDLDKEISKSKRYEKPL
SLMMIKLEFYDEIKALIGEIKMKELLKEIGKIITSFTRKEDISCKLGQDTLAILMPETDKNGAEVVKARIKETLKEINLN
KNKENNHINLDIKIGILQYDKTVENAFEFKKIAEKELEYDV

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 32514; Mature: 32514

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTIKKLDAYILLFLLDLFCILSFLFFNIDKNTIIDFIMLSVLFLILFISYFKRTVWSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSAISIFGLGSYTLYNNLVYGIEVIINTYMWMLAIPITAVLLAKIGEYINILEDTNINL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QQECENLVTIDKTTGLGNIKSFYMDLDKEISKSKRYEKPLSLMMIKLEFYDEIKALIGEI
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KMKELLKEIGKIITSFTRKEDISCKLGQDTLAILMPETDKNGAEVVKARIKETLKEINLN
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
KNKENNHINLDIKIGILQYDKTVENAFEFKKIAEKELEYDV
CCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKTIKKLDAYILLFLLDLFCILSFLFFNIDKNTIIDFIMLSVLFLILFISYFKRTVWSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSAISIFGLGSYTLYNNLVYGIEVIINTYMWMLAIPITAVLLAKIGEYINILEDTNINL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QQECENLVTIDKTTGLGNIKSFYMDLDKEISKSKRYEKPLSLMMIKLEFYDEIKALIGEI
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KMKELLKEIGKIITSFTRKEDISCKLGQDTLAILMPETDKNGAEVVKARIKETLKEINLN
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
KNKENNHINLDIKIGILQYDKTVENAFEFKKIAEKELEYDV
CCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]