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The map label for this gene is yjjU [H]

Identifier: 28210497

GI number: 28210497

Start: 826235

End: 827086

Strand: Direct

Name: yjjU [H]

Synonym: CTC00780

Alternate gene names: 28210497

Gene position: 826235-827086 (Clockwise)

Preceding gene: 28210496

Following gene: 28210498

Centisome position: 29.52

GC content: 27.7

Gene sequence:

>852_bases
ATGGATAAGGTGGGATTAATACTAGAAGGTGGAGGTATGAGAGGACTTTACACCGCAGGTATATTGGATTACTTTATGAA
AAAGGAATTTTATGCTCCTTATGTTATAGGGGTATCAATGGGGGCATGTAATGCTACATCATATATATCAAAACAAAATA
AAAGAAATAAGGCAGTAGTTATAAATCATGTAAATGATCCTAGATATATAGGAATTAAAAATATATTTAGATGTAAGAGT
TTATTAGGAATTGATTTAATTTATGATGAAATTCCTAATAAATTAGAGCCTTTTGATTACAAAGCTTTTTATGCATCTAA
ACAAAAATTTATTATAGTAGCTACAGATTGCAAAACCGGTAAGCCTGTATATTTTGATAAGGATAAAGATGAAGATATAT
TAACTACTGTAAGAGCTTCCAGTAGTTTACCCTTCATTAGTCCTATAGTTAGATATAATGGGATGGAACTTTTAGATGGG
GGAATATCAGACTCCATTCCCATAGGAAAATCTATAAAGGATGGTAATATTAAAAATATTATTATATTAACTAGACCTAA
AGGTTATAGAAAAGATCCTTTTAGGAGAAAAAGATTGTTAAAAAGATTTTATTCAAGCTATGATAATTTAATAAAGGCAA
TTGAAGATAGATATAGGATATATAATAGAACTTTAGATTATATAGAAAAATTGGAAGAAGAAAATAAGGTGTTTATTTTA
AGACCTACAAATAAAATAAAGGTAAGAAGAATAGAAAAAAACACAGAAAAGTTAGAAGGTCTTTATAAAATGGGATTTGA
AGATGCAGAAAAACAGTATGACAAAATGATAGACTGGGTTAATAATGCATAA

Upstream 100 bases:

>100_bases
TAAAAGATTCAGAAGATAAGTTGAAAATCATGGAAAAGACTATTATGGAAAAACTTAATTCCGTAGAATAAGAGAAAAGT
GTAATCATTGGAGGTACTAT

Downstream 100 bases:

>100_bases
ATCTATTGACATTGGGAAATATAAAATATATAATATTAATCAATAGTTTTAAATGGAAATTTTAAAAAAGACAGTGATGG
GAAGAGTAAGTGTAAAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDKVGLILEGGGMRGLYTAGILDYFMKKEFYAPYVIGVSMGACNATSYISKQNKRNKAVVINHVNDPRYIGIKNIFRCKS
LLGIDLIYDEIPNKLEPFDYKAFYASKQKFIIVATDCKTGKPVYFDKDKDEDILTTVRASSSLPFISPIVRYNGMELLDG
GISDSIPIGKSIKDGNIKNIIILTRPKGYRKDPFRRKRLLKRFYSSYDNLIKAIEDRYRIYNRTLDYIEKLEEENKVFIL
RPTNKIKVRRIEKNTEKLEGLYKMGFEDAEKQYDKMIDWVNNA

Sequences:

>Translated_283_residues
MDKVGLILEGGGMRGLYTAGILDYFMKKEFYAPYVIGVSMGACNATSYISKQNKRNKAVVINHVNDPRYIGIKNIFRCKS
LLGIDLIYDEIPNKLEPFDYKAFYASKQKFIIVATDCKTGKPVYFDKDKDEDILTTVRASSSLPFISPIVRYNGMELLDG
GISDSIPIGKSIKDGNIKNIIILTRPKGYRKDPFRRKRLLKRFYSSYDNLIKAIEDRYRIYNRTLDYIEKLEEENKVFIL
RPTNKIKVRRIEKNTEKLEGLYKMGFEDAEKQYDKMIDWVNNA
>Mature_283_residues
MDKVGLILEGGGMRGLYTAGILDYFMKKEFYAPYVIGVSMGACNATSYISKQNKRNKAVVINHVNDPRYIGIKNIFRCKS
LLGIDLIYDEIPNKLEPFDYKAFYASKQKFIIVATDCKTGKPVYFDKDKDEDILTTVRASSSLPFISPIVRYNGMELLDG
GISDSIPIGKSIKDGNIKNIIILTRPKGYRKDPFRRKRLLKRFYSSYDNLIKAIEDRYRIYNRTLDYIEKLEEENKVFIL
RPTNKIKVRRIEKNTEKLEGLYKMGFEDAEKQYDKMIDWVNNA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=269, Percent_Identity=27.5092936802974, Blast_Score=100, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32806; Mature: 32806

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVGLILEGGGMRGLYTAGILDYFMKKEFYAPYVIGVSMGACNATSYISKQNKRNKAVV
CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCEEE
INHVNDPRYIGIKNIFRCKSLLGIDLIYDEIPNKLEPFDYKAFYASKQKFIIVATDCKTG
EEECCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCEEEEEEECCCCC
KPVYFDKDKDEDILTTVRASSSLPFISPIVRYNGMELLDGGISDSIPIGKSIKDGNIKNI
CCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEE
IILTRPKGYRKDPFRRKRLLKRFYSSYDNLIKAIEDRYRIYNRTLDYIEKLEEENKVFIL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RPTNKIKVRRIEKNTEKLEGLYKMGFEDAEKQYDKMIDWVNNA
ECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKVGLILEGGGMRGLYTAGILDYFMKKEFYAPYVIGVSMGACNATSYISKQNKRNKAVV
CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCEEE
INHVNDPRYIGIKNIFRCKSLLGIDLIYDEIPNKLEPFDYKAFYASKQKFIIVATDCKTG
EEECCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCEEEEEEECCCCC
KPVYFDKDKDEDILTTVRASSSLPFISPIVRYNGMELLDGGISDSIPIGKSIKDGNIKNI
CCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEE
IILTRPKGYRKDPFRRKRLLKRFYSSYDNLIKAIEDRYRIYNRTLDYIEKLEEENKVFIL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RPTNKIKVRRIEKNTEKLEGLYKMGFEDAEKQYDKMIDWVNNA
ECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]