| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is pgcA [H]
Identifier: 28210496
GI number: 28210496
Start: 824484
End: 826205
Strand: Direct
Name: pgcA [H]
Synonym: CTC00779
Alternate gene names: 28210496
Gene position: 824484-826205 (Clockwise)
Preceding gene: 28210495
Following gene: 28210497
Centisome position: 29.45
GC content: 29.62
Gene sequence:
>1722_bases ATGAATTATATGAGAATTTATAATGAGTGGTTAAATAACGATTACTTTGATGATGTTACAAAAGAAGAATTAAAAAGTAT AAAAGATAATCCTAAGGAAATAGAAGATAGATTTTATAAAAATTTAGAGTTTGGAACAGCAGGACTTAGAGGTAAAATTG CAGCTGGTACAAATAGAATGAATAAATATATAATAGCTAAAGTAACTCAAGGACTTGCAAATTTTATAGCAAAACAAGGT AAAGAGGTAATGAATAGGGGGGTAGCTATAGCCTATGATTGTAGGCATTATTCAGATGTGTTTGCAAAAACTGCAGCATT AGTTTTGGCTGCAAATGGAATTAAAGCATATTTATTTGAAGATTTAAGACCAACACCAGAGTTATCCTATACAGTAAGGA GATTAAATACAATATCTGGAATAGTAGTAACAGCTAGTCATAACCCTAAAGATTATAATGGATATAAAGTGTACTGGGAA GATGGAGCACAAATATTAGATAAGATAGCCAAACCTGTTACAGAAGAGATAAATAACATTAAAAATTTTAAAGAAATAAA GTCCATATCTGAAGAAGAAGCTTTAGAAAAAGGTCTTTTAGAGATATTAGGAAAAGAAATAGATGATGAATATATAGAAA AAGTTAAGGCTTTATCTATAAGAAATGATATAGATAAGGACATAAAAATAGTTTACACACCATTAAATGGAACGGGAAAT ATTCCAGTAAGAAGAGTTCTAAGGGAAAGAAGATTTACCAATGTAATAGTTGTGCCAGAACAGGAAAATCCAGATCCAGA TTTTACCACAGTAGGTTATCCAAATCCAGAGGATATAAAAGCCTTTGAATATGCTAAAAGATTAGGAGAGAAAGAAAGAG CAGATTTATTATTAGCAACAGATCCTGATTGTGACAGACTAGCAGTAATGGCTAGAAATAATCGTGGAGAATTTGTGGCG TTAAATGGTAATCAAACAGGAGCTGTTTTAATAAAATATCTTGTGGAAAGTAAAGTAGAAAAGGGAACTTTACCTGAGAA ACCAATGATAGTAAAATCAGTAGTTACTGGTGACATGGGTAAAGTTGTAGGAGAAAAATATGGTGTTACTACCTTTGAAT CTCTTACAGGATTTAAAAATATTTGTGGTAAAGAAATGGAAATGAATAAAAAAGGATATAATTTTATTTTTGGATATGAA GAAAGCATAGGCTATACAGCTGGGGACTTTGTTAAAGATAAAGATGGAGTTATTTCAGCAATGTTTTTATGTGAGGCAGC GGCTTATTATAAAACACAAGGTAAAACTTTAATAGATGTGTTAAATGACATGTATAATGAATTTGGATATTATAGGGAAA ATTTAATTTCACTTATATTAGAAGGTGTTGAAGGACAAAGAAGAATAGGAAGAATGATGGAAGCATATAGGAATGAATTT CCTAAAATTATAGGAGATAATAAACTTATAAAGTATATAGACATAGATAAAGGAAAAGAAATTGATTTTATAACTAGGGA AGAAAAATCAGTAGAATTTCCTAAATCAAATGTACTTAAATTTATATTAGAAGATGGATCATGGTATGCTATTAGACCAT CGGGTACAGAACCCAAAATAAAAATATACTTATATTCTAAAGGGCATACTTTAAAAGATTCAGAAGATAAGTTGAAAATC ATGGAAAAGACTATTATGGAAAAACTTAATTCCGTAGAATAA
Upstream 100 bases:
>100_bases TTTTATAATATATTTTAGGAAATAATTATAATATATGCTAATAAACTATACAATAATCTGATAAAATAATAGTATATAAC AAAGGAAAGGGGATATATTT
Downstream 100 bases:
>100_bases GAGAAAAGTGTAATCATTGGAGGTACTATATGGATAAGGTGGGATTAATACTAGAAGGTGGAGGTATGAGAGGACTTTAC ACCGCAGGTATATTGGATTA
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MNYMRIYNEWLNNDYFDDVTKEELKSIKDNPKEIEDRFYKNLEFGTAGLRGKIAAGTNRMNKYIIAKVTQGLANFIAKQG KEVMNRGVAIAYDCRHYSDVFAKTAALVLAANGIKAYLFEDLRPTPELSYTVRRLNTISGIVVTASHNPKDYNGYKVYWE DGAQILDKIAKPVTEEINNIKNFKEIKSISEEEALEKGLLEILGKEIDDEYIEKVKALSIRNDIDKDIKIVYTPLNGTGN IPVRRVLRERRFTNVIVVPEQENPDPDFTTVGYPNPEDIKAFEYAKRLGEKERADLLLATDPDCDRLAVMARNNRGEFVA LNGNQTGAVLIKYLVESKVEKGTLPEKPMIVKSVVTGDMGKVVGEKYGVTTFESLTGFKNICGKEMEMNKKGYNFIFGYE ESIGYTAGDFVKDKDGVISAMFLCEAAAYYKTQGKTLIDVLNDMYNEFGYYRENLISLILEGVEGQRRIGRMMEAYRNEF PKIIGDNKLIKYIDIDKGKEIDFITREEKSVEFPKSNVLKFILEDGSWYAIRPSGTEPKIKIYLYSKGHTLKDSEDKLKI MEKTIMEKLNSVE
Sequences:
>Translated_573_residues MNYMRIYNEWLNNDYFDDVTKEELKSIKDNPKEIEDRFYKNLEFGTAGLRGKIAAGTNRMNKYIIAKVTQGLANFIAKQG KEVMNRGVAIAYDCRHYSDVFAKTAALVLAANGIKAYLFEDLRPTPELSYTVRRLNTISGIVVTASHNPKDYNGYKVYWE DGAQILDKIAKPVTEEINNIKNFKEIKSISEEEALEKGLLEILGKEIDDEYIEKVKALSIRNDIDKDIKIVYTPLNGTGN IPVRRVLRERRFTNVIVVPEQENPDPDFTTVGYPNPEDIKAFEYAKRLGEKERADLLLATDPDCDRLAVMARNNRGEFVA LNGNQTGAVLIKYLVESKVEKGTLPEKPMIVKSVVTGDMGKVVGEKYGVTTFESLTGFKNICGKEMEMNKKGYNFIFGYE ESIGYTAGDFVKDKDGVISAMFLCEAAAYYKTQGKTLIDVLNDMYNEFGYYRENLISLILEGVEGQRRIGRMMEAYRNEF PKIIGDNKLIKYIDIDKGKEIDFITREEKSVEFPKSNVLKFILEDGSWYAIRPSGTEPKIKIYLYSKGHTLKDSEDKLKI MEKTIMEKLNSVE >Mature_573_residues MNYMRIYNEWLNNDYFDDVTKEELKSIKDNPKEIEDRFYKNLEFGTAGLRGKIAAGTNRMNKYIIAKVTQGLANFIAKQG KEVMNRGVAIAYDCRHYSDVFAKTAALVLAANGIKAYLFEDLRPTPELSYTVRRLNTISGIVVTASHNPKDYNGYKVYWE DGAQILDKIAKPVTEEINNIKNFKEIKSISEEEALEKGLLEILGKEIDDEYIEKVKALSIRNDIDKDIKIVYTPLNGTGN IPVRRVLRERRFTNVIVVPEQENPDPDFTTVGYPNPEDIKAFEYAKRLGEKERADLLLATDPDCDRLAVMARNNRGEFVA LNGNQTGAVLIKYLVESKVEKGTLPEKPMIVKSVVTGDMGKVVGEKYGVTTFESLTGFKNICGKEMEMNKKGYNFIFGYE ESIGYTAGDFVKDKDGVISAMFLCEAAAYYKTQGKTLIDVLNDMYNEFGYYRENLISLILEGVEGQRRIGRMMEAYRNEF PKIIGDNKLIKYIDIDKGKEIDFITREEKSVEFPKSNVLKFILEDGSWYAIRPSGTEPKIKIYLYSKGHTLKDSEDKLKI MEKTIMEKLNSVE
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=555, Percent_Identity=32.6126126126126, Blast_Score=298, Evalue=9e-81, Organism=Homo sapiens, GI31377548, Length=560, Percent_Identity=32.5, Blast_Score=262, Evalue=8e-70, Organism=Escherichia coli, GI1789566, Length=266, Percent_Identity=30.0751879699248, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71993870, Length=575, Percent_Identity=31.8260869565217, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI71993878, Length=313, Percent_Identity=34.8242811501597, Blast_Score=164, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323934, Length=569, Percent_Identity=30.7557117750439, Blast_Score=241, Evalue=2e-64, Organism=Drosophila melanogaster, GI20129809, Length=559, Percent_Identity=29.695885509839, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24653722, Length=583, Percent_Identity=28.8164665523156, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI24651977, Length=432, Percent_Identity=31.9444444444444, Blast_Score=233, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 65306; Mature: 65306
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYMRIYNEWLNNDYFDDVTKEELKSIKDNPKEIEDRFYKNLEFGTAGLRGKIAAGTNRM CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCHH NKYIIAKVTQGLANFIAKQGKEVMNRGVAIAYDCRHYSDVFAKTAALVLAANGIKAYLFE HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH DLRPTPELSYTVRRLNTISGIVVTASHNPKDYNGYKVYWEDGAQILDKIAKPVTEEINNI HCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH KNFKEIKSISEEEALEKGLLEILGKEIDDEYIEKVKALSIRNDIDKDIKIVYTPLNGTGN HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC IPVRRVLRERRFTNVIVVPEQENPDPDFTTVGYPNPEDIKAFEYAKRLGEKERADLLLAT CHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHCCEEEEC DPDCDRLAVMARNNRGEFVALNGNQTGAVLIKYLVESKVEKGTLPEKPMIVKSVVTGDMG CCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHH KVVGEKYGVTTFESLTGFKNICGKEMEMNKKGYNFIFGYEESIGYTAGDFVKDKDGVISA HHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHH MFLCEAAAYYKTQGKTLIDVLNDMYNEFGYYRENLISLILEGVEGQRRIGRMMEAYRNEF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PKIIGDNKLIKYIDIDKGKEIDFITREEKSVEFPKSNVLKFILEDGSWYAIRPSGTEPKI CHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHEEECCCEEEECCCCCCCEE KIYLYSKGHTLKDSEDKLKIMEKTIMEKLNSVE EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYMRIYNEWLNNDYFDDVTKEELKSIKDNPKEIEDRFYKNLEFGTAGLRGKIAAGTNRM CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCHH NKYIIAKVTQGLANFIAKQGKEVMNRGVAIAYDCRHYSDVFAKTAALVLAANGIKAYLFE HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH DLRPTPELSYTVRRLNTISGIVVTASHNPKDYNGYKVYWEDGAQILDKIAKPVTEEINNI HCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH KNFKEIKSISEEEALEKGLLEILGKEIDDEYIEKVKALSIRNDIDKDIKIVYTPLNGTGN HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC IPVRRVLRERRFTNVIVVPEQENPDPDFTTVGYPNPEDIKAFEYAKRLGEKERADLLLAT CHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHCCEEEEC DPDCDRLAVMARNNRGEFVALNGNQTGAVLIKYLVESKVEKGTLPEKPMIVKSVVTGDMG CCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHH KVVGEKYGVTTFESLTGFKNICGKEMEMNKKGYNFIFGYEESIGYTAGDFVKDKDGVISA HHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHH MFLCEAAAYYKTQGKTLIDVLNDMYNEFGYYRENLISLILEGVEGQRRIGRMMEAYRNEF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PKIIGDNKLIKYIDIDKGKEIDFITREEKSVEFPKSNVLKFILEDGSWYAIRPSGTEPKI CHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHEEECCCEEEECCCCCCCEE KIYLYSKGHTLKDSEDKLKIMEKTIMEKLNSVE EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]