| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210493
Identifier: 28210493
GI number: 28210493
Start: 816402
End: 817469
Strand: Direct
Name: 28210493
Synonym: CTC00776
Alternate gene names: NA
Gene position: 816402-817469 (Clockwise)
Preceding gene: 28210492
Following gene: 28210494
Centisome position: 29.17
GC content: 32.96
Gene sequence:
>1068_bases ATGTTAAAAAAGTCTAAATTTAAAAAGATAATTTCTACTTCAATTATGACATTAATGCTAGCAGGTACTATAGACAGTGG AATACTTGGAATGAGACAAGTATATGTACATGCTGCTGAAAGTACACAAGTACAAACAGTATTAAAGAAATCTGTATCAT TAGAGGATGTAATACAAAGAACTTGCAAGGCAGTTTTGGAAAATCATTATTCCATGGATTGGGCTGCCATAGGTCTTGAC AGAGCAGGAAATAGGCACATGATTCCTGCAGATTATCTACAAAAAGTTGAAGAATATTTAAAAGATCCAAAAAATCAAAG TCTATTTGAAAGTAGACCTACAGAATATGAAAGAATAACACTTGGAGTATTAGCAGCAGGTGGAGATCCTACAAATGTTA ATGGATCAGGAATAAATCTTATAGAAAAGATATACAATGCAGATCTTGAATCACAAGGAATTAATGCATTAGTATTTGGT CTTATTGCATTAGATGCAAAAGGATATGAAATTCCTGAAGATGCAACATGGAATAGAGAAAAATTAGTAAATGCAATATT AGATAAGCAATGTGATGATGGAGGATGGGCATTCTTTGGTTCTAATGGTGATCCAGATATGACAGGAATGGCAATGACAT CATTAGCTCCTTATAAAAAAGGGAAAAAAGTGCTTGAATTAGATAATGCTAAAGTGAATAGTGCTGTAAATGAAGCTGTA GAATTTTTATCTGATATACAAAATGCTACAGGTGGATTTGAATCTTGGGGAACAGTAAATTCAGAAAGTTGTGCTCAAGT TATAATGGGGCTTTGCACAAATGGAATAGATGCAGGAAAAGATAAGAAATTTGTGAAAAATGGTAGAAGTGTTGTAGATG CACTTTTAAGCTTTGAAGTTGAAGGTGGGGGATTTGCTCACATAAATGATGAACGATTTGGTGGAGTTAATGGAATGGCA ACAGAACAAGCATTATATGCACTAGATCAATATAAACTTTATTTAGATACAAAGGGACAAGGTTCAATCTATGATTGGAG TACATATCCATCATCAGTAATAAAATAA
Upstream 100 bases:
>100_bases TGTAATGGTTAATGATATCCATATTAAAATTTCAAAAAAGGAGGGTGAGATCAGTATACTATGTTATTAAACATTCTATA TTTTAAGGGGGAGAATTAAT
Downstream 100 bases:
>100_bases TAGATATTTGAAATTTAGATGTATAAGACAAATGGGGAAACTAAAAAAAGAGTTTTCCCATTTTAAATATAACAGGAGGA CAAAATATGTTTAAGAATAA
Product: putative surface/cell-adhesion protein
Products: NA
Alternate protein names: Cell Wall Anchor Domain-Containing Protein; Copper Amine Oxidase Domain Protein; S-Layer Domain Protein; N-Acetylmuramoyl-L-Alanine Amidase; LPXTG-Motif Cell Wall Anchor Domain Protein; Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLKKSKFKKIISTSIMTLMLAGTIDSGILGMRQVYVHAAESTQVQTVLKKSVSLEDVIQRTCKAVLENHYSMDWAAIGLD RAGNRHMIPADYLQKVEEYLKDPKNQSLFESRPTEYERITLGVLAAGGDPTNVNGSGINLIEKIYNADLESQGINALVFG LIALDAKGYEIPEDATWNREKLVNAILDKQCDDGGWAFFGSNGDPDMTGMAMTSLAPYKKGKKVLELDNAKVNSAVNEAV EFLSDIQNATGGFESWGTVNSESCAQVIMGLCTNGIDAGKDKKFVKNGRSVVDALLSFEVEGGGFAHINDERFGGVNGMA TEQALYALDQYKLYLDTKGQGSIYDWSTYPSSVIK
Sequences:
>Translated_355_residues MLKKSKFKKIISTSIMTLMLAGTIDSGILGMRQVYVHAAESTQVQTVLKKSVSLEDVIQRTCKAVLENHYSMDWAAIGLD RAGNRHMIPADYLQKVEEYLKDPKNQSLFESRPTEYERITLGVLAAGGDPTNVNGSGINLIEKIYNADLESQGINALVFG LIALDAKGYEIPEDATWNREKLVNAILDKQCDDGGWAFFGSNGDPDMTGMAMTSLAPYKKGKKVLELDNAKVNSAVNEAV EFLSDIQNATGGFESWGTVNSESCAQVIMGLCTNGIDAGKDKKFVKNGRSVVDALLSFEVEGGGFAHINDERFGGVNGMA TEQALYALDQYKLYLDTKGQGSIYDWSTYPSSVIK >Mature_355_residues MLKKSKFKKIISTSIMTLMLAGTIDSGILGMRQVYVHAAESTQVQTVLKKSVSLEDVIQRTCKAVLENHYSMDWAAIGLD RAGNRHMIPADYLQKVEEYLKDPKNQSLFESRPTEYERITLGVLAAGGDPTNVNGSGINLIEKIYNADLESQGINALVFG LIALDAKGYEIPEDATWNREKLVNAILDKQCDDGGWAFFGSNGDPDMTGMAMTSLAPYKKGKKVLELDNAKVNSAVNEAV EFLSDIQNATGGFESWGTVNSESCAQVIMGLCTNGIDAGKDKKFVKNGRSVVDALLSFEVEGGGFAHINDERFGGVNGMA TEQALYALDQYKLYLDTKGQGSIYDWSTYPSSVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38733; Mature: 38733
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKSKFKKIISTSIMTLMLAGTIDSGILGMRQVYVHAAESTQVQTVLKKSVSLEDVIQR CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH TCKAVLENHYSMDWAAIGLDRAGNRHMIPADYLQKVEEYLKDPKNQSLFESRPTEYERIT HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHEEE LGVLAAGGDPTNVNGSGINLIEKIYNADLESQGINALVFGLIALDAKGYEIPEDATWNRE EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH KLVNAILDKQCDDGGWAFFGSNGDPDMTGMAMTSLAPYKKGKKVLELDNAKVNSAVNEAV HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCHHHCCCEEEEECCCHHHHHHHHHH EFLSDIQNATGGFESWGTVNSESCAQVIMGLCTNGIDAGKDKKFVKNGRSVVDALLSFEV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHEEE EGGGFAHINDERFGGVNGMATEQALYALDQYKLYLDTKGQGSIYDWSTYPSSVIK CCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCEEECCCCCHHHCC >Mature Secondary Structure MLKKSKFKKIISTSIMTLMLAGTIDSGILGMRQVYVHAAESTQVQTVLKKSVSLEDVIQR CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH TCKAVLENHYSMDWAAIGLDRAGNRHMIPADYLQKVEEYLKDPKNQSLFESRPTEYERIT HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHEEE LGVLAAGGDPTNVNGSGINLIEKIYNADLESQGINALVFGLIALDAKGYEIPEDATWNRE EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH KLVNAILDKQCDDGGWAFFGSNGDPDMTGMAMTSLAPYKKGKKVLELDNAKVNSAVNEAV HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCHHHCCCEEEEECCCHHHHHHHHHH EFLSDIQNATGGFESWGTVNSESCAQVIMGLCTNGIDAGKDKKFVKNGRSVVDALLSFEV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHEEE EGGGFAHINDERFGGVNGMATEQALYALDQYKLYLDTKGQGSIYDWSTYPSSVIK CCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA