Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is yheN [H]

Identifier: 28210475

GI number: 28210475

Start: 789859

End: 790839

Strand: Direct

Name: yheN [H]

Synonym: CTC00755

Alternate gene names: 28210475

Gene position: 789859-790839 (Clockwise)

Preceding gene: 28210474

Following gene: 28210476

Centisome position: 28.22

GC content: 27.42

Gene sequence:

>981_bases
ATGAAGCAAGATAAAGATTATGGTAGAAATTTATACTCAGATAACAGGAGAAAAAGTAGAATAAAAAGAAGAAAAAGAAC
TGCATTTTTACTTGCTATTTTACTTATATTTGCAAGTGGTATGTGGATTAAAAATTCTATTGATAAGAAAAAGATTTTAT
CCCACAATGAAAAACCTCAAGAAGAAACTATAGCAGATAAAAAGAAAAATAATGATGAAAAACTTGAAAAAGAAGAGAAA
AAAGAAGAAATTAAAGTGGAGAAAAAAGAGAATATATCTAAGAATGATAAAAAAGTGGACAAGGGTATAATTGTTGGACA
AGATGGTCTTAAGAGAAATGAAAACAACACTATAGTTATGACTGTTGATGAAATATGGAAGAATGAAGATAAAAAGAAAA
TTGCATTTTTAACCTTTGATGATGGTCCAAGTGAGTATACTCCACAAATATTAGATATACTTAAAAAATATAATATAAAA
TCCACCTTCTTTGTATTAGGAACTTCTGTAGATTCATATTCTCAGTATTTAAAAAGAGAAGTAGAAGAGGGACATGCTAT
AGGTAATCATACCTATAATCATAATATAAAATATTTTGGTAACTATACACCACAAAGCTTTGTACAAGATGTTAAAAAAT
GCGATGATTCAATAAGAAGAGTTTTAGGACAAGACTTCAAAACTAATTTAGTAAGATTCCCAGGTGGATCTTTTAACCAT
AAAAGTTATGAAAATGAACTTTTGAAGGCTGGCTTTAAACATATAGATTGGAATATAGAAAATGGTGATGCAAGAAGATT
AAATGTACCTAAAGAAGAATTATTAAATAATGTAAAAAGGGATATGGCAAATCACAATCATTTAGTTATATTAATGCATG
ATTCAGCTACTAAAAAAACTACAGTTGAATCCTTACCAGAATTAATAGAGCATCTAAAAAGTCAGGGGTTTGAATTTGGA
ATAATAAGTCAAAACAACTAA

Upstream 100 bases:

>100_bases
ATGTAACACTTTTGTTATAGATTTGTAAATACTTTTAGGATAAAATGTAGTAGAATAATAGTAAGATATTAAAAAGTATT
AAAGGCAAGGGTGATGTAAT

Downstream 100 bases:

>100_bases
TATAAAGAGCATATATAAAGATAAAGACTTTAGAAGGTTTTTATCTAATATATGCTTTTAATCTTTTTTTAATAATATAA
ATATGGTAAAATCTTAATTG

Product: putative peptidoglycan N-acetylglucosamine deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK
KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK
STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH
KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG
IISQNN

Sequences:

>Translated_326_residues
MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK
KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK
STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH
KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG
IISQNN
>Mature_326_residues
MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK
KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK
STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH
KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG
IISQNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 38022; Mature: 38022

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQ
CCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCC
EETIADKKKNNDEKLEKEEKKEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVM
HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEECCCCCCCCCCCEEEE
TVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIKSTFFVLGTSVDSYSQYLKRE
EEHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
VEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH
HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCC
KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKT
HHHHHHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
TVESLPELIEHLKSQGFEFGIISQNN
HHHHHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQ
CCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCC
EETIADKKKNNDEKLEKEEKKEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVM
HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEECCCCCCCCCCCEEEE
TVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIKSTFFVLGTSVDSYSQYLKRE
EEHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
VEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH
HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCC
KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKT
HHHHHHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
TVESLPELIEHLKSQGFEFGIISQNN
HHHHHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]