| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yheN [H]
Identifier: 28210475
GI number: 28210475
Start: 789859
End: 790839
Strand: Direct
Name: yheN [H]
Synonym: CTC00755
Alternate gene names: 28210475
Gene position: 789859-790839 (Clockwise)
Preceding gene: 28210474
Following gene: 28210476
Centisome position: 28.22
GC content: 27.42
Gene sequence:
>981_bases ATGAAGCAAGATAAAGATTATGGTAGAAATTTATACTCAGATAACAGGAGAAAAAGTAGAATAAAAAGAAGAAAAAGAAC TGCATTTTTACTTGCTATTTTACTTATATTTGCAAGTGGTATGTGGATTAAAAATTCTATTGATAAGAAAAAGATTTTAT CCCACAATGAAAAACCTCAAGAAGAAACTATAGCAGATAAAAAGAAAAATAATGATGAAAAACTTGAAAAAGAAGAGAAA AAAGAAGAAATTAAAGTGGAGAAAAAAGAGAATATATCTAAGAATGATAAAAAAGTGGACAAGGGTATAATTGTTGGACA AGATGGTCTTAAGAGAAATGAAAACAACACTATAGTTATGACTGTTGATGAAATATGGAAGAATGAAGATAAAAAGAAAA TTGCATTTTTAACCTTTGATGATGGTCCAAGTGAGTATACTCCACAAATATTAGATATACTTAAAAAATATAATATAAAA TCCACCTTCTTTGTATTAGGAACTTCTGTAGATTCATATTCTCAGTATTTAAAAAGAGAAGTAGAAGAGGGACATGCTAT AGGTAATCATACCTATAATCATAATATAAAATATTTTGGTAACTATACACCACAAAGCTTTGTACAAGATGTTAAAAAAT GCGATGATTCAATAAGAAGAGTTTTAGGACAAGACTTCAAAACTAATTTAGTAAGATTCCCAGGTGGATCTTTTAACCAT AAAAGTTATGAAAATGAACTTTTGAAGGCTGGCTTTAAACATATAGATTGGAATATAGAAAATGGTGATGCAAGAAGATT AAATGTACCTAAAGAAGAATTATTAAATAATGTAAAAAGGGATATGGCAAATCACAATCATTTAGTTATATTAATGCATG ATTCAGCTACTAAAAAAACTACAGTTGAATCCTTACCAGAATTAATAGAGCATCTAAAAAGTCAGGGGTTTGAATTTGGA ATAATAAGTCAAAACAACTAA
Upstream 100 bases:
>100_bases ATGTAACACTTTTGTTATAGATTTGTAAATACTTTTAGGATAAAATGTAGTAGAATAATAGTAAGATATTAAAAAGTATT AAAGGCAAGGGTGATGTAAT
Downstream 100 bases:
>100_bases TATAAAGAGCATATATAAAGATAAAGACTTTAGAAGGTTTTTATCTAATATATGCTTTTAATCTTTTTTTAATAATATAA ATATGGTAAAATCTTAATTG
Product: putative peptidoglycan N-acetylglucosamine deacetylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG IISQNN
Sequences:
>Translated_326_residues MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG IISQNN >Mature_326_residues MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQEETIADKKKNNDEKLEKEEK KEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVMTVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIK STFFVLGTSVDSYSQYLKREVEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKTTVESLPELIEHLKSQGFEFG IISQNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR002509 [H]
Pfam domain/function: PF01522 Polysacc_deac_1 [H]
EC number: NA
Molecular weight: Translated: 38022; Mature: 38022
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQ CCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCC EETIADKKKNNDEKLEKEEKKEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVM HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEECCCCCCCCCCCEEEE TVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIKSTFFVLGTSVDSYSQYLKRE EEHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH VEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCC KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKT HHHHHHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHH TVESLPELIEHLKSQGFEFGIISQNN HHHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MKQDKDYGRNLYSDNRRKSRIKRRKRTAFLLAILLIFASGMWIKNSIDKKKILSHNEKPQ CCCCCHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCC EETIADKKKNNDEKLEKEEKKEEIKVEKKENISKNDKKVDKGIIVGQDGLKRNENNTIVM HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEECCCCCCCCCCCEEEE TVDEIWKNEDKKKIAFLTFDDGPSEYTPQILDILKKYNIKSTFFVLGTSVDSYSQYLKRE EEHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH VEEGHAIGNHTYNHNIKYFGNYTPQSFVQDVKKCDDSIRRVLGQDFKTNLVRFPGGSFNH HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCC KSYENELLKAGFKHIDWNIENGDARRLNVPKEELLNNVKRDMANHNHLVILMHDSATKKT HHHHHHHHHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHH TVESLPELIEHLKSQGFEFGIISQNN HHHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]