| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210413
Identifier: 28210413
GI number: 28210413
Start: 709479
End: 711554
Strand: Direct
Name: 28210413
Synonym: CTC00689
Alternate gene names: NA
Gene position: 709479-711554 (Clockwise)
Preceding gene: 28210410
Following gene: 28210420
Centisome position: 25.35
GC content: 24.37
Gene sequence:
>2076_bases GTGATTATTTTGGAGGCAAGACAGATAGGTTTATTAGGACTATTGTCTGGAGAAGATAGAAGATTTGTAATACCTGTATT TCAAAGAAATTATGATTGGAAAGAAGAGCAATGTATGCAACTATTTAAAGATGTAGAAAATGTGTACTTAAGTGAACATA GAAGAAGTCATTTTCTTGGTACAATAGTTTACATATCAAATAGTGAAGTTGATATGATAGATTTTCATGAATACATGCTA ATAGATGGACAACAAAGAATAACCACTACTGTTTTATTATTAAAAGCTATACATGATTGCTTAAAAAATAAAAATGATAT GGAAAGTAAAAAGCTTAAAGATAGAATTTATGAATATTATTTGACTAATAAATATGCAGATGAGAGCCACAAGTTAAGAC TAAAACCTATGATAGAAGATGATAAAGTTTTTCAAGATATTATGAGAGATGACTTTGACTTTATAGACAAGGATTCTAAT ATTTATAAAAATTATATTTTATTTATAAATTTAATAAATAAATCTAAGTTGGATCCTAATCATATATTTAAAGGGATACA AAAAATTGTAGTTGTTTATATAAGTCTTAAAAGGGGAGAAGACGATCCGCAGCTGATATTTGAAAGTATAAATTCTACAG GTCTAAATTTAACAGAAGCAGATTTAATAAGGAATTTTATACTTATGGATAAGGAAGCGGCTGAACAGAATGAACTTTAT AATAAATATTGGCGTAAAATCGAAAGAATATTAGGAAATGAAAATATATCTAGTTTTATTAGAGATTATCTAACTATGAA ACAGAATGATATACCTAAAAAGGATAAAGTGTATTTAGAATTTAAAAGATATGTTTATGAAAACAATTGGAATAGTAATA TAGAAATACTTTTAGAAAATATATTATATTTTGCAAAAATATACGAAAAATTTATTAAAGCTAGTGAAGAAGATAAGGAT ATTAAAATGATTCTTCAAGATATAAGATTATTAAAGGTTACAGTTTCATATCCATTTTTAATGGAGGTATATGATGATTA TCAAAAGGAAGTAATAGATAAAGAAACTTTGATTAAAGTTTATAAATTAGTAGAAACCTATGTATTCAGAAGATTTATAT GCAATAGTCCAACCAGTGCTTTGAATAAGGTTTTTAAAAATTTAGCAAGAGAGCTCAAAAGAGAAAAAGATTATAAAGAT ATGTACTATGATATGCTGGTAGCAATTCTTCTAAACAAAAAATATAGTGCAGCTTTTCCAACAGATTTAGAATTTAAACA GGAATTTTTATCTAGAAATATGTATAAATTTAAACATGTAAATTACCTATTAGAACATTTGGAAAATAATAACAATAAAG AAAAAGTAGATGTAGAAGAATTAAGTATAGAACATATAATGCCCCAAAAATTAGATGCAAAATGGACTTTAAAACTTGGA AATAATGCCCAAGCTATTCATGAAAGATATATCCACAATATAGGGAATCTTACTTTAACAGGGTATAATTCTAATCTATC AAATAAGTCATTTGATGATAAAAAGATTATATTAGAAAAAAGCAGATTAAAATTAAATAAAGGAATAAGTAATTTTACAA CATGGAATGAAGAAATTATAATAAAAAGAGCTGTAGAATTATTTAGTATAGCTATTAAAAATTGGAGTGCTCCTAAAGTA AATAAGGATTTAATTAACTATATAGGAATTGATGAAAAGGAATATTTGGATTTATCTGATGAAATCGATGTTACAGGTAG AAAACCTGTTGCTTTTGAAATTTTGGGAGAAAAACATAATATAAATAGTTGGAAAAGACTTATATGTGAGTGTTCACAAA TTTTGTATAATTTAGATAAGGATATATTTAAAAGTTTCATAAATGATAGTGATTTTGCAGGAAGAAAAAATAGGATAGTA TCTTCAAATTTAATTGATATAAGAGAAATGTTTAAAATTGAAAATAATATATATATAGAAACAAAATTAAATGCTAATTC AACCCTAAACTATATAAAATTAATGATGGAAAAATATAATCTTTCTGATGAGGATTTTAAATTTTGGATTAAGTAA
Upstream 100 bases:
>100_bases CAAATGTTTTATTAAATAACTGTTAGTTATCCATATTTTTTAAAAATATCAACTATATATGTTATTTATGGTAGAATACT GTTATAAACTGTTTTAGAGG
Downstream 100 bases:
>100_bases GATAGACAAACATTTAAGAAGTGTGATTATGAATTAATTGGTGAAAATAGCAGTGTTAATTACACTGCCATTTTTAATGT TATTTACCAACAAAAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 691; Mature: 691
Protein sequence:
>691_residues MIILEARQIGLLGLLSGEDRRFVIPVFQRNYDWKEEQCMQLFKDVENVYLSEHRRSHFLGTIVYISNSEVDMIDFHEYML IDGQQRITTTVLLLKAIHDCLKNKNDMESKKLKDRIYEYYLTNKYADESHKLRLKPMIEDDKVFQDIMRDDFDFIDKDSN IYKNYILFINLINKSKLDPNHIFKGIQKIVVVYISLKRGEDDPQLIFESINSTGLNLTEADLIRNFILMDKEAAEQNELY NKYWRKIERILGNENISSFIRDYLTMKQNDIPKKDKVYLEFKRYVYENNWNSNIEILLENILYFAKIYEKFIKASEEDKD IKMILQDIRLLKVTVSYPFLMEVYDDYQKEVIDKETLIKVYKLVETYVFRRFICNSPTSALNKVFKNLARELKREKDYKD MYYDMLVAILLNKKYSAAFPTDLEFKQEFLSRNMYKFKHVNYLLEHLENNNNKEKVDVEELSIEHIMPQKLDAKWTLKLG NNAQAIHERYIHNIGNLTLTGYNSNLSNKSFDDKKIILEKSRLKLNKGISNFTTWNEEIIIKRAVELFSIAIKNWSAPKV NKDLINYIGIDEKEYLDLSDEIDVTGRKPVAFEILGEKHNINSWKRLICECSQILYNLDKDIFKSFINDSDFAGRKNRIV SSNLIDIREMFKIENNIYIETKLNANSTLNYIKLMMEKYNLSDEDFKFWIK
Sequences:
>Translated_691_residues MIILEARQIGLLGLLSGEDRRFVIPVFQRNYDWKEEQCMQLFKDVENVYLSEHRRSHFLGTIVYISNSEVDMIDFHEYML IDGQQRITTTVLLLKAIHDCLKNKNDMESKKLKDRIYEYYLTNKYADESHKLRLKPMIEDDKVFQDIMRDDFDFIDKDSN IYKNYILFINLINKSKLDPNHIFKGIQKIVVVYISLKRGEDDPQLIFESINSTGLNLTEADLIRNFILMDKEAAEQNELY NKYWRKIERILGNENISSFIRDYLTMKQNDIPKKDKVYLEFKRYVYENNWNSNIEILLENILYFAKIYEKFIKASEEDKD IKMILQDIRLLKVTVSYPFLMEVYDDYQKEVIDKETLIKVYKLVETYVFRRFICNSPTSALNKVFKNLARELKREKDYKD MYYDMLVAILLNKKYSAAFPTDLEFKQEFLSRNMYKFKHVNYLLEHLENNNNKEKVDVEELSIEHIMPQKLDAKWTLKLG NNAQAIHERYIHNIGNLTLTGYNSNLSNKSFDDKKIILEKSRLKLNKGISNFTTWNEEIIIKRAVELFSIAIKNWSAPKV NKDLINYIGIDEKEYLDLSDEIDVTGRKPVAFEILGEKHNINSWKRLICECSQILYNLDKDIFKSFINDSDFAGRKNRIV SSNLIDIREMFKIENNIYIETKLNANSTLNYIKLMMEKYNLSDEDFKFWIK >Mature_691_residues MIILEARQIGLLGLLSGEDRRFVIPVFQRNYDWKEEQCMQLFKDVENVYLSEHRRSHFLGTIVYISNSEVDMIDFHEYML IDGQQRITTTVLLLKAIHDCLKNKNDMESKKLKDRIYEYYLTNKYADESHKLRLKPMIEDDKVFQDIMRDDFDFIDKDSN IYKNYILFINLINKSKLDPNHIFKGIQKIVVVYISLKRGEDDPQLIFESINSTGLNLTEADLIRNFILMDKEAAEQNELY NKYWRKIERILGNENISSFIRDYLTMKQNDIPKKDKVYLEFKRYVYENNWNSNIEILLENILYFAKIYEKFIKASEEDKD IKMILQDIRLLKVTVSYPFLMEVYDDYQKEVIDKETLIKVYKLVETYVFRRFICNSPTSALNKVFKNLARELKREKDYKD MYYDMLVAILLNKKYSAAFPTDLEFKQEFLSRNMYKFKHVNYLLEHLENNNNKEKVDVEELSIEHIMPQKLDAKWTLKLG NNAQAIHERYIHNIGNLTLTGYNSNLSNKSFDDKKIILEKSRLKLNKGISNFTTWNEEIIIKRAVELFSIAIKNWSAPKV NKDLINYIGIDEKEYLDLSDEIDVTGRKPVAFEILGEKHNINSWKRLICECSQILYNLDKDIFKSFINDSDFAGRKNRIV SSNLIDIREMFKIENNIYIETKLNANSTLNYIKLMMEKYNLSDEDFKFWIK
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82432; Mature: 82432
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILEARQIGLLGLLSGEDRRFVIPVFQRNYDWKEEQCMQLFKDVENVYLSEHRRSHFLG CEEEEECCCCEEEEECCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE TIVYISNSEVDMIDFHEYMLIDGQQRITTTVLLLKAIHDCLKNKNDMESKKLKDRIYEYY EEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LTNKYADESHKLRLKPMIEDDKVFQDIMRDDFDFIDKDSNIYKNYILFINLINKSKLDPN HHCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHEEEEEECCCCCCCHH HIFKGIQKIVVVYISLKRGEDDPQLIFESINSTGLNLTEADLIRNFILMDKEAAEQNELY HHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH NKYWRKIERILGNENISSFIRDYLTMKQNDIPKKDKVYLEFKRYVYENNWNSNIEILLEN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH ILYFAKIYEKFIKASEEDKDIKMILQDIRLLKVTVSYPFLMEVYDDYQKEVIDKETLIKV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHH YKLVETYVFRRFICNSPTSALNKVFKNLARELKREKDYKDMYYDMLVAILLNKKYSAAFP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC TDLEFKQEFLSRNMYKFKHVNYLLEHLENNNNKEKVDVEELSIEHIMPQKLDAKWTLKLG CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC NNAQAIHERYIHNIGNLTLTGYNSNLSNKSFDDKKIILEKSRLKLNKGISNFTTWNEEII CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH IKRAVELFSIAIKNWSAPKVNKDLINYIGIDEKEYLDLSDEIDVTGRKPVAFEILGEKHN HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCC INSWKRLICECSQILYNLDKDIFKSFINDSDFAGRKNRIVSSNLIDIREMFKIENNIYIE CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE TKLNANSTLNYIKLMMEKYNLSDEDFKFWIK EECCCCCHHHHHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure MIILEARQIGLLGLLSGEDRRFVIPVFQRNYDWKEEQCMQLFKDVENVYLSEHRRSHFLG CEEEEECCCCEEEEECCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE TIVYISNSEVDMIDFHEYMLIDGQQRITTTVLLLKAIHDCLKNKNDMESKKLKDRIYEYY EEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LTNKYADESHKLRLKPMIEDDKVFQDIMRDDFDFIDKDSNIYKNYILFINLINKSKLDPN HHCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHEEEEEECCCCCCCHH HIFKGIQKIVVVYISLKRGEDDPQLIFESINSTGLNLTEADLIRNFILMDKEAAEQNELY HHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH NKYWRKIERILGNENISSFIRDYLTMKQNDIPKKDKVYLEFKRYVYENNWNSNIEILLEN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH ILYFAKIYEKFIKASEEDKDIKMILQDIRLLKVTVSYPFLMEVYDDYQKEVIDKETLIKV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHH YKLVETYVFRRFICNSPTSALNKVFKNLARELKREKDYKDMYYDMLVAILLNKKYSAAFP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC TDLEFKQEFLSRNMYKFKHVNYLLEHLENNNNKEKVDVEELSIEHIMPQKLDAKWTLKLG CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC NNAQAIHERYIHNIGNLTLTGYNSNLSNKSFDDKKIILEKSRLKLNKGISNFTTWNEEII CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH IKRAVELFSIAIKNWSAPKVNKDLINYIGIDEKEYLDLSDEIDVTGRKPVAFEILGEKHN HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCC INSWKRLICECSQILYNLDKDIFKSFINDSDFAGRKNRIVSSNLIDIREMFKIENNIYIE CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE TKLNANSTLNYIKLMMEKYNLSDEDFKFWIK EECCCCCHHHHHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA