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The map label for this gene is yitL [H]

Identifier: 28210379

GI number: 28210379

Start: 670295

End: 671200

Strand: Direct

Name: yitL [H]

Synonym: CTC00652

Alternate gene names: 28210379

Gene position: 670295-671200 (Clockwise)

Preceding gene: 28210371

Following gene: 28210380

Centisome position: 23.95

GC content: 28.04

Gene sequence:

>906_bases
ATGTTTGTATACTATGATATAATTAATATAAAATTAAATGAGAAATACGGAGGGAATAATTTGGAACATTTAGGAAAATA
TGAAGAGTTTACAATAGTAAGAAATGGTGCACCAGGATACTACCTAGACATGAAAACAGGAAATACCAGTGATGATGTAT
TACTACCTCACAGTGATGTAGAAGGAAAAGAATTAAAGATAGGGGATAAAGTTAAAGTTTTTATATATAAAGACTCTAAA
AATAGACCTATTGCAACAATAAAAGAACCATTAGCAGAGGTTGGGGACATAGCTTATTTAGAAGTGGTAGATAATACACC
TATGGGTAGTTTTATAAATATAGGAGTGCCTAAAGATATACTTATACCTATGGCAGAAAAAAAATATCCTCTAATTGTAG
GAAAAAAATATTTGTTTTATATATACATAGACAAATCAGAAAGAATAGCGGCTACTACAGATATAGAATCCTATTTAGAA
ATGGCAGAAGGCTACAAAATAGGAGATGAAGTAGATGGAATAATTTATGATATTTATGATAATAATAGTGTAGCTGTAGC
AGTAGAAGGTAAATATAGAGCTGTTATGCTAAAAAATGAATACTATGTAAAAGTAAATCCAGGAGATAAACTAAAATTTA
AAGTAAAAAGAATTTATGAAGATGGAAATTTAGGTCTTACTATAAGAATTACAGGAAAAGAACAGAGGGATAAATTACAA
GAAGATATATTAGAATATCTTAAAGAGAATAATGGATTTATGCCTCTAAACGACTATTCATCACCAGAGGACATAAAAAA
TGTATTTAAGGAAAGTAAAAATTATTTTAAAAGATCTCTAGGTGGTCTTATGAAAAAAGGACTTATAGAACAAACAAAAG
AAGGAACTAAACTTATACAAAAATAA

Upstream 100 bases:

>100_bases
ATACACAAATATAAATATAAATACTATTTGAAATATAAACATTTTAAATACCCCCTAATAATATATAAATATATTATATA
ATAGTTCCATAGTTAAAAGA

Downstream 100 bases:

>100_bases
GGAAAAGATAGGTGTTTTAAAAACATCTATCTTTTTTTGAAAAATTAATAATAAATTAAGAATAAAATTGTTAAAATTAA
TGTAGAAAAGGCTATAATTA

Product: S1 RNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFVYYDIINIKLNEKYGGNNLEHLGKYEEFTIVRNGAPGYYLDMKTGNTSDDVLLPHSDVEGKELKIGDKVKVFIYKDSK
NRPIATIKEPLAEVGDIAYLEVVDNTPMGSFINIGVPKDILIPMAEKKYPLIVGKKYLFYIYIDKSERIAATTDIESYLE
MAEGYKIGDEVDGIIYDIYDNNSVAVAVEGKYRAVMLKNEYYVKVNPGDKLKFKVKRIYEDGNLGLTIRITGKEQRDKLQ
EDILEYLKENNGFMPLNDYSSPEDIKNVFKESKNYFKRSLGGLMKKGLIEQTKEGTKLIQK

Sequences:

>Translated_301_residues
MFVYYDIINIKLNEKYGGNNLEHLGKYEEFTIVRNGAPGYYLDMKTGNTSDDVLLPHSDVEGKELKIGDKVKVFIYKDSK
NRPIATIKEPLAEVGDIAYLEVVDNTPMGSFINIGVPKDILIPMAEKKYPLIVGKKYLFYIYIDKSERIAATTDIESYLE
MAEGYKIGDEVDGIIYDIYDNNSVAVAVEGKYRAVMLKNEYYVKVNPGDKLKFKVKRIYEDGNLGLTIRITGKEQRDKLQ
EDILEYLKENNGFMPLNDYSSPEDIKNVFKESKNYFKRSLGGLMKKGLIEQTKEGTKLIQK
>Mature_301_residues
MFVYYDIINIKLNEKYGGNNLEHLGKYEEFTIVRNGAPGYYLDMKTGNTSDDVLLPHSDVEGKELKIGDKVKVFIYKDSK
NRPIATIKEPLAEVGDIAYLEVVDNTPMGSFINIGVPKDILIPMAEKKYPLIVGKKYLFYIYIDKSERIAATTDIESYLE
MAEGYKIGDEVDGIIYDIYDNNSVAVAVEGKYRAVMLKNEYYVKVNPGDKLKFKVKRIYEDGNLGLTIRITGKEQRDKLQ
EDILEYLKENNGFMPLNDYSSPEDIKNVFKESKNYFKRSLGGLMKKGLIEQTKEGTKLIQK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34421; Mature: 34421

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVYYDIINIKLNEKYGGNNLEHLGKYEEFTIVRNGAPGYYLDMKTGNTSDDVLLPHSDV
CEEEEEEEEEEEECCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCCC
EGKELKIGDKVKVFIYKDSKNRPIATIKEPLAEVGDIAYLEVVDNTPMGSFINIGVPKDI
CCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCHHH
LIPMAEKKYPLIVGKKYLFYIYIDKSERIAATTDIESYLEMAEGYKIGDEVDGIIYDIYD
EEECCCCCCCEEEECEEEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEC
NNSVAVAVEGKYRAVMLKNEYYVKVNPGDKLKFKVKRIYEDGNLGLTIRITGKEQRDKLQ
CCEEEEEECCCEEEEEEECEEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHH
EDILEYLKENNGFMPLNDYSSPEDIKNVFKESKNYFKRSLGGLMKKGLIEQTKEGTKLIQ
HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MFVYYDIINIKLNEKYGGNNLEHLGKYEEFTIVRNGAPGYYLDMKTGNTSDDVLLPHSDV
CEEEEEEEEEEEECCCCCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCCC
EGKELKIGDKVKVFIYKDSKNRPIATIKEPLAEVGDIAYLEVVDNTPMGSFINIGVPKDI
CCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCHHH
LIPMAEKKYPLIVGKKYLFYIYIDKSERIAATTDIESYLEMAEGYKIGDEVDGIIYDIYD
EEECCCCCCCEEEECEEEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEC
NNSVAVAVEGKYRAVMLKNEYYVKVNPGDKLKFKVKRIYEDGNLGLTIRITGKEQRDKLQ
CCEEEEEECCCEEEEEEECEEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHH
EDILEYLKENNGFMPLNDYSSPEDIKNVFKESKNYFKRSLGGLMKKGLIEQTKEGTKLIQ
HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]