Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210347

Identifier: 28210347

GI number: 28210347

Start: 639228

End: 639869

Strand: Direct

Name: 28210347

Synonym: CTC00615

Alternate gene names: NA

Gene position: 639228-639869 (Clockwise)

Preceding gene: 28210346

Following gene: 28210350

Centisome position: 22.84

GC content: 29.44

Gene sequence:

>642_bases
ATGAGTATTAATAATATTACAAGAAATTATGGGGGATATTTAAATAATTTATCAATGATGAATTCTGAAACTAAAGATAC
ATATTCATCAAAAAACAGTGCGGGAAGATCTTTAGAATTTAAGGATAGCATAGATATTTCTGCATCAAGAAAAAATTTTC
CAAGGGTAAATGGGATTGGAGGAATAACTATAGATAAAGGAACTGCAGCACATACAACTTTATATGTTGATAGAGGTTCT
TTTGAGAAAATATTGAACTATAGTGCTAATAATCCAGAATGTCAATGGGAGGAAATGGGTATTGATGATGATAAAAGATG
GGTTGTTATTAATGGACAACGTTTTGAATGTCCACTTAGCGAAGAGGAAAAAGAAGCTCGTAGAAGACTTAGAAAAGGAA
TTATTGAGATATTAACTGAAGCTGATAAGGAAAGAGAAAAGCGTAAGTCTAAATCTAAACAAGAAAGGCTTGGTTCTGTT
AAACTAAGTTTTGATAAAAATAATAAAATTAATTTAAATGGTAATACAAGTTTACAATCAAGTGATAAGATTAAAAACCT
TATGAAAAATGATAAGGTAATGAAGATGTTAAGAGATATTGACGGCATAAATGGTGGACAAGGCATTAGGTTATCATTAT
AA

Upstream 100 bases:

>100_bases
AAATGGGGTATAGAAAATATAACAGATAAATAAATTAACTATTAAAGTAGGAAACAATTTGAAACGAAGATAATATTATT
AAAAGAAAGAAGGTGTTAAT

Downstream 100 bases:

>100_bases
ACAGAGTTCTTGGCTTCAGAAGGAGTTTTTACTCCCATTGAAGCTTAGAAATCGTTATCCAGGAGGGACGTAGCCGCTTT
TTACTTCCACTTTAAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSINNITRNYGGYLNNLSMMNSETKDTYSSKNSAGRSLEFKDSIDISASRKNFPRVNGIGGITIDKGTAAHTTLYVDRGS
FEKILNYSANNPECQWEEMGIDDDKRWVVINGQRFECPLSEEEKEARRRLRKGIIEILTEADKEREKRKSKSKQERLGSV
KLSFDKNNKINLNGNTSLQSSDKIKNLMKNDKVMKMLRDIDGINGGQGIRLSL

Sequences:

>Translated_213_residues
MSINNITRNYGGYLNNLSMMNSETKDTYSSKNSAGRSLEFKDSIDISASRKNFPRVNGIGGITIDKGTAAHTTLYVDRGS
FEKILNYSANNPECQWEEMGIDDDKRWVVINGQRFECPLSEEEKEARRRLRKGIIEILTEADKEREKRKSKSKQERLGSV
KLSFDKNNKINLNGNTSLQSSDKIKNLMKNDKVMKMLRDIDGINGGQGIRLSL
>Mature_212_residues
SINNITRNYGGYLNNLSMMNSETKDTYSSKNSAGRSLEFKDSIDISASRKNFPRVNGIGGITIDKGTAAHTTLYVDRGSF
EKILNYSANNPECQWEEMGIDDDKRWVVINGQRFECPLSEEEKEARRRLRKGIIEILTEADKEREKRKSKSKQERLGSVK
LSFDKNNKINLNGNTSLQSSDKIKNLMKNDKVMKMLRDIDGINGGQGIRLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24177; Mature: 24045

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINNITRNYGGYLNNLSMMNSETKDTYSSKNSAGRSLEFKDSIDISASRKNFPRVNGIG
CCCCHHHHHHCCHHHHHHHHCCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
GITIDKGTAAHTTLYVDRGSFEKILNYSANNPECQWEEMGIDDDKRWVVINGQRFECPLS
CEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEECCCEEECCCC
EEEKEARRRLRKGIIEILTEADKEREKRKSKSKQERLGSVKLSFDKNNKINLNGNTSLQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCC
SDKIKNLMKNDKVMKMLRDIDGINGGQGIRLSL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
SINNITRNYGGYLNNLSMMNSETKDTYSSKNSAGRSLEFKDSIDISASRKNFPRVNGIG
CCCHHHHHHCCHHHHHHHHCCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
GITIDKGTAAHTTLYVDRGSFEKILNYSANNPECQWEEMGIDDDKRWVVINGQRFECPLS
CEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEECCCEEECCCC
EEEKEARRRLRKGIIEILTEADKEREKRKSKSKQERLGSVKLSFDKNNKINLNGNTSLQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCC
SDKIKNLMKNDKVMKMLRDIDGINGGQGIRLSL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA