| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210346
Identifier: 28210346
GI number: 28210346
Start: 638579
End: 639160
Strand: Direct
Name: 28210346
Synonym: CTC00614
Alternate gene names: NA
Gene position: 638579-639160 (Clockwise)
Preceding gene: 28210344
Following gene: 28210347
Centisome position: 22.81
GC content: 21.13
Gene sequence:
>582_bases ATGAAAAAATTATTAATTACAATAATTATTATGTTTAGTTTTTTATTAGGAGGGTGTAGTTCAAATGATAAAGAAGTAAA AAAAGATAATAAAAATATTAGAAATATAGAGGAACATTCAAATAAAATAAATTTACAAGATGAGAAAGTAAAATTTATAA TAAATGAAATGGAACCTGACAAAAGTAAGCCTTTTAAATTGGGAATGTCTATTGATAGAGTAAAGTCAATTTTAGAGAAA AATAATATAAAAATTGATAATGAAATTGAAATAACTTCGGATTTTAATGATAAGCATTTTGGAGACAAAGAACTTTCTAC AGAATCTATAATATTTGATTTTGATAAAAAATATAATAAATTATATGCAATAACTAGTACAAAAGATGTTAATACATCAT TAGATTTAAAAATAGGTGATTCTATAGATAAAATGAAAAAGCTATATGGCATAAGTTATGATAAGAAGTCTACATCTGAT GGAGAATTGTATTTATATAATATGAAGAATTATTATTTTTTTGTTTATACAGAAGATGGTAAAGTTGTGAAATGGGGTAT AGAAAATATAACAGATAAATAA
Upstream 100 bases:
>100_bases ATGAAAAATTTCAAGTAAGTGTTAATATATAATTAAATTCAGAAATTATATTATGGAATAGATAAAACATAGTTAATACA GATAAGTTTAAGGAGGAAAT
Downstream 100 bases:
>100_bases ATTAACTATTAAAGTAGGAAACAATTTGAAACGAAGATAATATTATTAAAAGAAAGAAGGTGTTAATATGAGTATTAATA ATATTACAAGAAATTATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKKLLITIIIMFSFLLGGCSSNDKEVKKDNKNIRNIEEHSNKINLQDEKVKFIINEMEPDKSKPFKLGMSIDRVKSILEK NNIKIDNEIEITSDFNDKHFGDKELSTESIIFDFDKKYNKLYAITSTKDVNTSLDLKIGDSIDKMKKLYGISYDKKSTSD GELYLYNMKNYYFFVYTEDGKVVKWGIENITDK
Sequences:
>Translated_193_residues MKKLLITIIIMFSFLLGGCSSNDKEVKKDNKNIRNIEEHSNKINLQDEKVKFIINEMEPDKSKPFKLGMSIDRVKSILEK NNIKIDNEIEITSDFNDKHFGDKELSTESIIFDFDKKYNKLYAITSTKDVNTSLDLKIGDSIDKMKKLYGISYDKKSTSD GELYLYNMKNYYFFVYTEDGKVVKWGIENITDK >Mature_193_residues MKKLLITIIIMFSFLLGGCSSNDKEVKKDNKNIRNIEEHSNKINLQDEKVKFIINEMEPDKSKPFKLGMSIDRVKSILEK NNIKIDNEIEITSDFNDKHFGDKELSTESIIFDFDKKYNKLYAITSTKDVNTSLDLKIGDSIDKMKKLYGISYDKKSTSD GELYLYNMKNYYFFVYTEDGKVVKWGIENITDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22506; Mature: 22506
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLITIIIMFSFLLGGCSSNDKEVKKDNKNIRNIEEHSNKINLQDEKVKFIINEMEPD CHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHEEEEEECCCCC KSKPFKLGMSIDRVKSILEKNNIKIDNEIEITSDFNDKHFGDKELSTESIIFDFDKKYNK CCCCEEECCCHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCE LYAITSTKDVNTSLDLKIGDSIDKMKKLYGISYDKKSTSDGELYLYNMKNYYFFVYTEDG EEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCC KVVKWGIENITDK CEEEECCCCCCCC >Mature Secondary Structure MKKLLITIIIMFSFLLGGCSSNDKEVKKDNKNIRNIEEHSNKINLQDEKVKFIINEMEPD CHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCHHHEEEEEECCCCC KSKPFKLGMSIDRVKSILEKNNIKIDNEIEITSDFNDKHFGDKELSTESIIFDFDKKYNK CCCCEEECCCHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCE LYAITSTKDVNTSLDLKIGDSIDKMKKLYGISYDKKSTSDGELYLYNMKNYYFFVYTEDG EEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCC KVVKWGIENITDK CEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA