| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210305
Identifier: 28210305
GI number: 28210305
Start: 588597
End: 588965
Strand: Direct
Name: 28210305
Synonym: CTC00569
Alternate gene names: NA
Gene position: 588597-588965 (Clockwise)
Preceding gene: 28210303
Following gene: 28210306
Centisome position: 21.03
GC content: 24.93
Gene sequence:
>369_bases TTGCAAGGTGAAAGGAGGAACGTAAAAATGAATTGGCTATTATTTTTTCTAAAATTATTTGGCTTTGCAATTGTTACTAT TATAATATACAATGTACTAAATATATATGTATTATCAAAATATAAGCCTAATAAATGGATTATATTTGCTTTAGCTACAG CTATGCTAGTGGGACCACAGGCCATGAAACCTGGATTTTATAATACTATACCAGGATTATTGGTATCAGTTGTATTTATA ATATTATTTTTATGGTTTATCGATTTATTTAAAAACGATAAATATGAAATGAAGAACAAAGAAAAAGATATAAAAATTAG ACCAAAAGCAAAACCAAATAGAGTTAAACATAACAAAGATAAAAATTAA
Upstream 100 bases:
>100_bases ATGTATTTATAAATATTATTATACAAGTATTATACAAAAAATAAATTGTTTTTGTTGATATATTCAATAAAATATAGAAT AATAATATAGTAGGCTTAAT
Downstream 100 bases:
>100_bases AAAAAAGCCTGTATCTAAGTTTTATGATTAATATATAATTTAGTACAGGCTTATTATAAAGTTAAATTTGTTTAATTAGC AAGAGAATTATAGATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MQGERRNVKMNWLLFFLKLFGFAIVTIIIYNVLNIYVLSKYKPNKWIIFALATAMLVGPQAMKPGFYNTIPGLLVSVVFI ILFLWFIDLFKNDKYEMKNKEKDIKIRPKAKPNRVKHNKDKN
Sequences:
>Translated_122_residues MQGERRNVKMNWLLFFLKLFGFAIVTIIIYNVLNIYVLSKYKPNKWIIFALATAMLVGPQAMKPGFYNTIPGLLVSVVFI ILFLWFIDLFKNDKYEMKNKEKDIKIRPKAKPNRVKHNKDKN >Mature_122_residues MQGERRNVKMNWLLFFLKLFGFAIVTIIIYNVLNIYVLSKYKPNKWIIFALATAMLVGPQAMKPGFYNTIPGLLVSVVFI ILFLWFIDLFKNDKYEMKNKEKDIKIRPKAKPNRVKHNKDKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14427; Mature: 14427
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGERRNVKMNWLLFFLKLFGFAIVTIIIYNVLNIYVLSKYKPNKWIIFALATAMLVGPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCH AMKPGFYNTIPGLLVSVVFIILFLWFIDLFKNDKYEMKNKEKDIKIRPKAKPNRVKHNKD HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCCCCCCCCCC KN CC >Mature Secondary Structure MQGERRNVKMNWLLFFLKLFGFAIVTIIIYNVLNIYVLSKYKPNKWIIFALATAMLVGPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCH AMKPGFYNTIPGLLVSVVFIILFLWFIDLFKNDKYEMKNKEKDIKIRPKAKPNRVKHNKD HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCCCCCCCCCC KN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA